RNA–Protein interactions for RNA: ENST00000566047.5

CMC2-215, Transcript of C-X9-C motif containing 2, human

TSL 2

Gene CMC2, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-215	ENST00000566047	PRKCG	P05129	697 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	EBLN1	P0CF75	366 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	ZFX	P17010	805 aa	Predicted RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	NCL	P19338	710 aa	Known RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	ITGAL	P20701	1170 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	PDC	P20941	246 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	CCND1	P24385	295 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	RECQL	P46063	649 aa	Predicted RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	CCT8	P50990	548 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	HK3	P52790	923 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	ATXN1	P54253	815 aa	Known RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	FAM153C	Q494X1	144 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	THEMIS2	Q5TEJ8	643 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	VPS53	Q5VIR6	699 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	HEATR3	Q7Z4Q2	680 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	C1QL2	Q7Z5L3	287 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	TNPO1	Q92973	898 aa	Known RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	FAM136A	Q96C01	138 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	SIK2	Q9H0K1	926 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	MRPL46	Q9H2W6	279 aa	Known RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	EHD3	Q9NZN3	535 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	RNF7	Q9UBF6	113 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	ABCF2	Q9UG63	623 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	ZDHHC8	Q9ULC8	765 aa		4.16	□□□□□ -1.74
CMC2-215	ENST00000566047	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	LINC01548	A6NM66	108 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	FTL	P02792	175 aa	Predicted RBP	4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	CELA2A	P08217	269 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	CD6	P30203	668 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	MAP2K6	P52564	334 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	TFF2	Q03403	129 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	BOP1	Q14137	746 aa	Known RBP	4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	TMEM240	Q5SV17	173 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	USP45	Q70EL2	814 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	USP37	Q86T82	979 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	PPP1R3B	Q86XI6	285 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	ANKRD13A	Q8IZ07	590 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	KLHDC4	Q8TBB5	520 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	GPATCH3	Q96I76	525 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	SERHL	Q9NQF3	203 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	SERTAD4	Q9NUC0	356 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	SERGEF	Q9UGK8	458 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	PADI4	Q9UM07	663 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	SPEF1	Q9Y4P9	236 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	COL4A3BP	Q9Y5P4	624 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047	RAD54B	Q9Y620	910 aa		4.15	□□□□□ -1.75
CMC2-215	ENST00000566047		M0QYG6	137 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	SNUPN	O95149	360 aa	Known RBP	4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	AHSG	P02765	367 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	GNAI2	P04899	355 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	TYR	P14679	529 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	JUP	P14923	745 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	GCLC	P48506	637 aa	Predicted RBP	4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	TBCC	Q15814	346 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF551	Q7Z340	670 aa	Predicted RBP	4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	CATIP	Q7Z7H3	387 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	SMG7	Q92540	1137 aa	Known RBP	4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF778	Q96MU6	729 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	C1QTNF7	Q9BXJ2	289 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	PCDH12	Q9NPG4	1184 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	LMBRD1	Q9NUN5	540 aa		4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF70	Q9UC06	446 aa	Predicted RBP	4.14	□□□□□ -1.75
CMC2-215	ENST00000566047	PPM1D	O15297	605 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	NXPH3	O95157	252 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	PDHA1	P08559	390 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	POU2F2	P09086	479 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	PIM1	P11309	404 aa	Predicted RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF81	P51508	661 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF134	P52741	427 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	EXOSC9	Q06265	439 aa	Known RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	SLC10A2	Q12908	348 aa	Predicted RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	EIF2B5	Q13144	721 aa	Known RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	BMPR2	Q13873	1038 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	LLGL1	Q15334	1064 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	PLAC9	Q5JTB6	97 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	KIAA1614	Q5VZ46	1190 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	SUMO4	Q6EEV6	95 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	CPA6	Q8N4T0	437 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	FAM46D	Q8NEK8	389 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	SEMA6D	Q8NFY4	1073 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	SCARB1	Q8WTV0	552 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	ATRIP	Q8WXE1	791 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	DDX17	Q92841	729 aa	Known RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	NAF1	Q96HR8	494 aa	Known RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	SLC29A3	Q9BZD2	475 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	GTPBP4	Q9BZE4	634 aa	Known RBP	4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	ARHGEF3	Q9NR81	526 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	FLRT1	Q9NZU1	646 aa		4.13	□□□□□ -1.75
CMC2-215	ENST00000566047	WDR91	A4D1P6	747 aa		4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	TARM1	B6A8C7	271 aa		4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	EZH2	Q15910	746 aa	Known RBP	4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	PGS1	Q32NB8	556 aa		4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	TMEM119	Q4V9L6	283 aa		4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	ZNF618	Q5T7W0	954 aa		4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	TEDDM1	Q5T9Z0	273 aa		4.12	□□□□□ -1.75
CMC2-215	ENST00000566047	FAM160B1	Q5W0V3	765 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms