RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 GRM6O15303 877 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 RB1P06400 928 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 TPM1P09493 284 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 PNMA6AP0CW24 399 aaPredicted RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 KRT5P13647 590 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 WARSP23381 471 aaKnown RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 USP8P40818 1118 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 INCA1Q0VD86 236 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 PTPROQ16827 1216 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 RTP2Q5QGT7 225 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 VARS2Q5ST30 1063 aaKnown RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 KIAA1841Q6NSI8 718 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 VPS52Q8N1B4 723 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 TTC39CQ8N584 583 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 UBR7Q8N806 425 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 SHC3Q92529 594 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 FAM124BQ9H5Z6 455 aaPredicted RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 ALG13Q9NP73 1137 aaKnown RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 HMGXB4Q9UGU5 601 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 PUF60Q9UHX1 559 aaKnown RBP16.29■□□□□ 0.2
KNOP1-203ENST00000565844 PCDHB4Q9Y5E5 795 aa16.29■□□□□ 0.2
KNOP1-203ENST00000565844 H3BQ06 376 aaPredicted RBP16.28■□□□□ 0.2
KNOP1-203ENST00000565844 CILPO75339 1184 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 URODP06132 367 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 FAM163BP0C2L3 166 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 CASP14P31944 242 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 GNL1P36915 607 aaPredicted RBP16.28■□□□□ 0.2
KNOP1-203ENST00000565844 LHX1P48742 406 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 GLUD2P49448 558 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 NDST1P52848 882 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 JAM2P57087 298 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 OSTM1Q86WC4 334 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 SPC24Q8NBT2 197 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 ZNF397Q8NF99 534 aaPredicted RBP16.28■□□□□ 0.2
KNOP1-203ENST00000565844 SPATA18Q8TC71 538 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 RIN2Q8WYP3 895 aaPredicted RBP16.28■□□□□ 0.2
KNOP1-203ENST00000565844 BAP1Q92560 729 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 EDEM3Q9BZQ6 932 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 GPR88Q9GZN0 384 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 DDX43Q9NXZ2 648 aaKnown RBP16.28■□□□□ 0.2
KNOP1-203ENST00000565844 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
KNOP1-203ENST00000565844 CAPN11Q9UMQ6 739 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 LZTS1Q9Y250 596 aa16.28■□□□□ 0.2
KNOP1-203ENST00000565844 LRRC53A6NM62 1247 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 A8MXQ7 604 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
KNOP1-203ENST00000565844 FOXN3O00409 490 aaPredicted RBP16.27■□□□□ 0.2
KNOP1-203ENST00000565844 C2CD2LO14523 706 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 GABRDO14764 452 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 HCRTO43612 131 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 OAZ2O95190 189 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 TBX2Q13207 712 aaPredicted RBP16.27■□□□□ 0.2
KNOP1-203ENST00000565844 ORC1Q13415 861 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 THEM5Q8N1Q8 247 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 RBBP8NLQ8NC74 664 aaPredicted RBP16.27■□□□□ 0.2
KNOP1-203ENST00000565844 CHST7Q9NS84 486 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 RAPGEFL1Q9UHV5 662 aa16.27■□□□□ 0.2
KNOP1-203ENST00000565844 LUC7L2Q9Y383 392 aaKnown RBP16.27■□□□□ 0.2
KNOP1-203ENST00000565844 H7C4K7 107 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 PDGFRBP09619 1106 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 IL9P15248 144 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 ACAT1P24752 427 aaKnown RBP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 LMO2P25791 158 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 CA8P35219 290 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 GTF2F1P35269 517 aaKnown RBP eCLIP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 SOX5P35711 763 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 STAT1P42224 750 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 ZBED6P86452 979 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 DSG1Q02413 1049 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 UBE3AQ05086 875 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 CTXN3Q4LDR2 81 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 ZNF280DQ6N043 979 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 PDXDC1Q6P996 788 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 PRSS55Q6UWB4 352 aaPredicted RBP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 UNC93AQ86WB7 457 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 SPPL3Q8TCT6 385 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 POF1BQ8WVV4 589 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 PIK3R5Q8WYR1 880 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 TWNKQ96RR1 684 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 RTP3Q9BQQ7 232 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 NT5C1AQ9BXI3 368 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 ELOVL4Q9GZR5 314 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 DNAI2Q9GZS0 605 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 ZBP1Q9H171 429 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 NSUN3Q9H649 340 aaKnown RBP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 MRPL17Q9NRX2 175 aaKnown RBP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 CNTN6Q9UQ52 1028 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 NME7Q9Y5B8 376 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.26■□□□□ 0.19
KNOP1-203ENST00000565844 GOLGA6L6A8MZA4 724 aa16.26■□□□□ 0.19
KNOP1-203ENST00000565844 MFAP3LO75121 409 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms