RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 PBKQ96KB5 322 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 ABCB6Q9NP58 842 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 ZNF446Q9NWS9 450 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 SMARCAL1Q9NZC9 954 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 CTTNBP2NLQ9P2B4 639 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 TUBGCP4Q9UGJ1 667 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 AMFRQ9UKV5 643 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 COG5Q9UP83 839 aa19.67■□□□□ 0.74
EDC3-208ENST00000565602 KCNK3O14649 394 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 SOX4Q06945 474 aaPredicted RBP19.66■□□□□ 0.74
EDC3-208ENST00000565602 SGSM1Q2NKQ1 1148 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 TMEM270Q6UE05 265 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 OTOP2Q7RTS6 562 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 NPAS4Q8IUM7 802 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 UBR7Q8N806 425 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 RBBP8NLQ8NC74 664 aaPredicted RBP19.66■□□□□ 0.74
EDC3-208ENST00000565602 TSPAN18Q96SJ8 248 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.66■□□□□ 0.742e-6■■□□□ 11.7
EDC3-208ENST00000565602 NIF3L1Q9GZT8 377 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
EDC3-208ENST00000565602 SIX4Q9UIU6 781 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 GTF3C4Q9UKN8 822 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 PCDHB7Q9Y5E2 793 aa19.66■□□□□ 0.74
EDC3-208ENST00000565602 MTA2O94776 668 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 CALCAP01258 141 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 GATMP50440 423 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 PTPROQ16827 1216 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 C11orf63Q6NUN7 778 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 CC2D1AQ6P1N0 951 aaPredicted RBP19.65■□□□□ 0.74
EDC3-208ENST00000565602 ZNF653Q96CK0 615 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 HES6Q96HZ4 224 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 MS4A14Q96JA4 679 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 LAMA2P24043 3122 aaKnown RBP19.65■□□□□ 0.74
EDC3-208ENST00000565602 TARSL2A2RTX5 802 aaKnown RBP19.65■□□□□ 0.74
EDC3-208ENST00000565602 EFCAB14O75071 495 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 GNA15P30679 374 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 ZNF699Q32M78 642 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 CCDC70Q6NSX1 233 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 WDR93Q6P2C0 686 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 RPS6KC1Q96S38 1066 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 UBQLN1Q9UMX0 589 aaKnown RBP19.65■□□□□ 0.74
EDC3-208ENST00000565602 CEP290O15078 2479 aa19.65■□□□□ 0.74
EDC3-208ENST00000565602 ATMINO43313 823 aaPredicted RBP19.64■□□□□ 0.73
EDC3-208ENST00000565602 FGBP02675 491 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 CYP1A2P05177 515 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 UNGP13051 313 aaPredicted RBP19.64■□□□□ 0.73
EDC3-208ENST00000565602 SMYD5Q6GMV2 418 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 GLB1LQ6UWU2 654 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 TRIM72Q6ZMU5 477 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 TMCO2Q7Z6W1 182 aaPredicted RBP19.64■□□□□ 0.73
EDC3-208ENST00000565602 TOP1MTQ969P6 601 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 CASD1Q96PB1 797 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 SELENOOQ9BVL4 669 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 GOLGA2P5Q9HBQ8 144 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 DPP3Q9NY33 737 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 INPP5FQ9Y2H2 1132 aa19.64■□□□□ 0.73
EDC3-208ENST00000565602 B4GALT3O60512 393 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 ZRANB2O95218 330 aaKnown RBP eCLIP19.63■□□□□ 0.73
EDC3-208ENST00000565602 POMCP01189 267 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 ITGB3P05106 788 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 THP07101 528 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 ZNF132P52740 706 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 VSNL1P62760 191 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 PSRC1Q6PGN9 363 aaPredicted RBP19.63■□□□□ 0.73
EDC3-208ENST00000565602 ARFGAP3Q9NP61 516 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 CXXC1Q9P0U4 656 aaPredicted RBP19.63■□□□□ 0.73
EDC3-208ENST00000565602 LRFN2Q9ULH4 789 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 KIAA1671Q9BY89 1806 aa19.63■□□□□ 0.73
EDC3-208ENST00000565602 ERLIN1O75477 346 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 CYP1A1P04798 512 aaPredicted RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 CYP3A5P20815 502 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 MCM3P25205 808 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 GRIK3Q13003 919 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 NOMO2Q5JPE7 1267 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 HNRNPLLQ8WVV9 542 aaKnown RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 TRIM11Q96F44 468 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 LBHD1Q9BQE6 289 aaPredicted RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 NUP85Q9BW27 656 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 XYLT2Q9H1B5 865 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 RC3H2Q9HBD1 1191 aaKnown RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 RBM12Q9NTZ6 932 aaKnown RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 UVRAGQ9P2Y5 699 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 ITGA11Q9UKX5 1188 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 NR2E3Q9Y5X4 410 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 PPEF2O14830 753 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 DGKIO75912 1065 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 SEC31AO94979 1220 aaKnown RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 UPP2O95045 317 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 AMHP03971 560 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 CENPCQ03188 943 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 BEST2Q8NFU1 509 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 ZNF564Q8TBZ8 553 aaPredicted RBP19.62■□□□□ 0.73
EDC3-208ENST00000565602 ACTRT1Q8TDG2 376 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 HERVK_113Q902F9 699 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 TBC1D13Q9NVG8 400 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 CACNG4Q9UBN1 327 aa19.62■□□□□ 0.73
EDC3-208ENST00000565602 DDX3YO15523 660 aaKnown RBP19.61■□□□□ 0.73
EDC3-208ENST00000565602 THAP12O43422 761 aa19.61■□□□□ 0.73
EDC3-208ENST00000565602 MYBL1P10243 752 aa19.61■□□□□ 0.73
EDC3-208ENST00000565602 LRPAP1P30533 357 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms