RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 GRSF1Q12849 480 aaKnown RBP eCLIP23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 SF3A2Q15428 464 aaKnown RBP23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 MGAT5BQ3V5L5 792 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 TMEM196Q5HYL7 178 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 C9orf57Q5W0N0 161 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 JADE1Q6IE81 842 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 CDK5RAP3Q96JB5 506 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 FAM83CQ9BQN1 747 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 SLC46A2Q9BY10 475 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 ODF2LQ9ULJ1 636 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 SLC8A2Q9UPR5 921 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 DERAQ9Y315 318 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 FRYQ5TBA9 3013 aa23.11■■□□□ 1.29
RPUSD1-206ENST00000565503 CACNA1GO43497 2377 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 TRDMT1O14717 391 aaKnown RBP23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 CCDC192P0DO97 292 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 ATP2C1P98194 919 aaPredicted RBP23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 TAF12Q16514 161 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 PLA2G2CQ5R387 149 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 N4BP2L1Q5TBK1 243 aaPredicted RBP23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 PKN3Q6P5Z2 889 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 KBTBD6Q86V97 674 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 CMTM8Q8IZV2 173 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 GKN1Q9NS71 199 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 TBX20Q9UMR3 447 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 FAM208BQ5VWN6 2430 aa23.1■■□□□ 1.29
RPUSD1-206ENST00000565503 A0A0B4J269 797 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 NPHP3-ACAD11A0A0J9YXS1 232 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 ANO9A1A5B4 782 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 AMPD2Q01433 879 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 RUNX3Q13761 415 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 TMEM132DQ14C87 1099 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 TMEM119Q4V9L6 283 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 ARSHQ5FYA8 562 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 STPG1Q5TH74 334 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 FSTL4Q6MZW2 842 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 METTL23Q86XA0 190 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 CAMKK1Q8N5S9 505 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 SPPL2BQ8TCT7 592 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 FAM212AQ96EL1 285 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 ZC3H10Q96K80 434 aaKnown RBP23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 PLIN2Q99541 437 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 MSTO1Q9BUK6 570 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 CPSF3Q9UKF6 684 aaKnown RBP23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 MYO16Q9Y6X6 1858 aa23.09■■□□□ 1.29
RPUSD1-206ENST00000565503 KIAA1549LQ6ZVL6 1849 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 NUP205Q92621 2012 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 SOBPA7XYQ1 873 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 DDX6P26196 483 aaKnown RBP eCLIP23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 AVPR1AP37288 418 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 PXNP49023 591 aaPredicted RBP23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 CCDC6Q16204 474 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 RILPL1Q5EBL4 403 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 THEM5Q8N1Q8 247 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 SMG9Q9H0W8 520 aaKnown RBP23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 KIF9Q9HAQ2 790 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 HPS4Q9NQG7 708 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 RXFP3Q9NSD7 469 aa23.08■■□□□ 1.29
RPUSD1-206ENST00000565503 SLC26A4O43511 780 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 NFICP08651 508 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 HAPLN1P10915 354 aaPredicted RBP23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 ABCD1P33897 745 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 CHFRQ96EP1 664 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 REEP2Q9BRK0 252 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 ASB7Q9H672 318 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 VPS45Q9NRW7 570 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 C2CD2Q9Y426 696 aa23.07■■□□□ 1.28
RPUSD1-206ENST00000565503 K7ENM7 598 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 CYB561D2O14569 222 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 DRD1P21728 446 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 MPLP40238 635 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 ZNF131P52739 623 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 BFSP1Q12934 665 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 ARL6IP4Q66PJ3 421 aaKnown RBP23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 TMEM150AQ86TG1 271 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 GIPC2Q8TF65 315 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 CCSER1Q9C0I3 900 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 EBF3Q9H4W6 596 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 TDP1Q9NUW8 608 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 CCL26Q9Y258 94 aa23.06■■□□□ 1.28
RPUSD1-206ENST00000565503 VWA3AA6NCI4 1184 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 OTOL1A6NHN0 477 aaPredicted RBP23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 F11P03951 625 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 TAF6P49848 677 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 NLRP12P59046 1061 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 FBXO43Q4G163 708 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 SLC39A4Q6P5W5 647 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 LRRTM3Q86VH5 581 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 DCP1BQ8IZD4 617 aaKnown RBP23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 MYCT1Q8N699 235 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 MAB21L3Q8N8X9 362 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 USP13Q92995 863 aaPredicted RBP23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 EXOC4Q96A65 974 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 PYM1Q9BRP8 204 aaKnown RBP23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 LSM14BQ9BX40 385 aaKnown RBP23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 PARVGQ9HBI0 331 aa23.05■■□□□ 1.28
RPUSD1-206ENST00000565503 RNF40O75150 1001 aa23.04■■□□□ 1.28
RPUSD1-206ENST00000565503 FAM13AO94988 1023 aa23.04■■□□□ 1.28
RPUSD1-206ENST00000565503 EGFP01133 1207 aa23.04■■□□□ 1.28
RPUSD1-206ENST00000565503 HMGA1P17096 107 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms