RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TSSK4Q6SA08 328 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 GAREM2Q75VX8 874 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 TMC8Q8IU68 726 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 SPATA2LQ8IUW3 424 aaPredicted RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 SCN4BQ8IWT1 228 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 NELFCDQ8IXH7 590 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 KIAA2013Q8IYS2 634 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 MAML2Q8IZL2 1156 aaPredicted RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 PDCL2Q8N4E4 241 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 C1orf127Q8N9H9 656 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 C2orf15Q8WU43 125 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 SNX21Q969T3 373 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 CLDN23Q96B33 292 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 HPDLQ96IR7 371 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 MMS19Q96T76 1030 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 ACBD6Q9BR61 282 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 SLC46A2Q9BY10 475 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 FGFBP2Q9BYJ0 223 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 SMG9Q9H0W8 520 aaKnown RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 BLZF1Q9H2G9 400 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 TNMDQ9H2S6 317 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 CUEDC2Q9H467 287 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 TASP1Q9H6P5 420 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 C8orf33Q9H7E9 229 aaPredicted RBP6.9□□□□□ -1.3
TCF4-228ENST00000565393 KIAA1586Q9HCI6 787 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 TRPV5Q9NQA5 729 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 GKN1Q9NS71 199 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 FBXO4Q9UKT5 387 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 ITGA11Q9UKX5 1188 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 CFAP45Q9UL16 551 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 PIAS3Q9Y6X2 628 aa6.9□□□□□ -1.3
TCF4-228ENST00000565393 REV3LO60673 3130 aa6.9□□□□□ -1.31
TCF4-228ENST00000565393 TECTAO75443 2155 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 BRWD1Q9NSI6 2320 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 FRMD3A2A2Y4 597 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 SLC38A8A6NNN8 435 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CLIC2O15247 247 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 PHACTR2O75167 634 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CLSTN1O94985 981 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 YEATS4O95619 227 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CST3P01034 146 aaPredicted RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 ZSCAN22P10073 491 aaPredicted RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 CYP2F1P24903 491 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 AVPR1AP37288 418 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 RPS9P46781 194 aaKnown RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 ID4P47928 161 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CXCL12P48061 93 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 SOX9P48436 509 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 LHX1P48742 406 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 GPR15P49685 360 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CYP2J2P51589 502 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 NRLP54845 237 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 MTAPQ13126 283 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 FZD5Q13467 585 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 ZNF528Q3MIS6 628 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 ARHGAP29Q52LW3 1261 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 SCARA3Q6AZY7 606 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 DPH6Q7L8W6 267 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 BRSK2Q8IWQ3 736 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CEP57L1Q8IYX8 460 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CMTM8Q8IZV2 173 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 TMEM86AQ8N2M4 240 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 DCLK2Q8N568 766 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 CELF5Q8N6W0 485 aaKnown RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 LRRC52Q8N7C0 313 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 MAB21L3Q8N8X9 362 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 GLIS3Q8NEA6 775 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 ZNF507Q8TCN5 953 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 BPIFB1Q8TDL5 484 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 RUBCNQ92622 972 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 SECISBP2LQ93073 1101 aaKnown RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 CCDC127Q96BQ5 260 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 RSPRY1Q96DX4 576 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 ZFYVE19Q96K21 471 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 FAM84AQ96KN4 292 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 LRRC3BQ96PB8 259 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 C7orf25Q9BPX7 421 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 TRIM9Q9C026 710 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 MTMR12Q9C0I1 747 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 SNX25Q9H3E2 840 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 SLC39A2Q9NP94 309 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 TMLHEQ9NVH6 421 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 INTS13Q9NVM9 706 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 KBTBD4Q9NVX7 518 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 ZSCAN32Q9NX65 697 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 GDAP2Q9NXN4 497 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 GTSE1Q9NYZ3 720 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 HSPBP1Q9NZL4 362 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 MAGEC2Q9UBF1 373 aaPredicted RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 PCDHA7Q9UN72 937 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 L1RE1Q9UN81 338 aa6.89□□□□□ -1.31
TCF4-228ENST00000565393 MORC2Q9Y6X9 1032 aaPredicted RBP6.89□□□□□ -1.31
TCF4-228ENST00000565393 PLXNA3P51805 1871 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 MYBPHLA2RUH7 354 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 SHISA7A6NL88 538 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 EIF3DO15371 548 aaKnown RBP eCLIP6.88□□□□□ -1.31
TCF4-228ENST00000565393 ATP2C2O75185 946 aa6.88□□□□□ -1.31
TCF4-228ENST00000565393 F13A1P00488 732 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms