RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PYM1Q9BRP8 204 aaKnown RBP19.95■□□□□ 0.78
CLN6-204ENST00000564752 CHRDQ9H2X0 955 aa19.95■□□□□ 0.78
CLN6-204ENST00000564752 ATXN3LQ9H3M9 355 aa19.95■□□□□ 0.78
CLN6-204ENST00000564752 LMAN1LQ9HAT1 526 aa19.95■□□□□ 0.78
CLN6-204ENST00000564752 PCDHB13Q9Y5F0 798 aa19.95■□□□□ 0.78
CLN6-204ENST00000564752 DNAH14Q0VDD8 3507 aa19.95■□□□□ 0.78
CLN6-204ENST00000564752 GABRR2P28476 465 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 CASP5P51878 434 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 AMPD3Q01432 767 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 SMARCB1Q12824 385 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 WSCD1Q658N2 575 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 GPIHBP1Q8IV16 184 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 SYCP3Q8IZU3 236 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 C2orf15Q8WU43 125 aaKnown RBP19.94■□□□□ 0.78
CLN6-204ENST00000564752 LRRC3BQ96PB8 259 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 SEPT5Q99719 369 aaPredicted RBP19.94■□□□□ 0.78
CLN6-204ENST00000564752 LPIN3Q9BQK8 851 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 IER2Q9BTL4 223 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 FAM126AQ9BYI3 521 aaPredicted RBP19.94■□□□□ 0.78
CLN6-204ENST00000564752 TRIM9Q9C026 710 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 MAGEF1Q9HAY2 307 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 KBTBD4Q9NVX7 518 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 FAM13BQ9NYF5 915 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 PCDHA7Q9UN72 937 aa19.94■□□□□ 0.78
CLN6-204ENST00000564752 KPNA7A9QM74 516 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 CHRNB1P11230 501 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 ATF6P18850 670 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 CCNE1P24864 410 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 WEE1P30291 646 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 CDR1P51861 262 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 ASIC1P78348 528 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 MGAT5BQ3V5L5 792 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 ARHGAP15Q53QZ3 475 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 GPR158Q5T848 1215 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 STXBP4Q6ZWJ1 553 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 ZSWIM2Q8NEG5 633 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 CSGALNACT1Q8TDX6 532 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 FAM213AQ9BRX8 229 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 FGFBP2Q9BYJ0 223 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 OBP2AQ9NY56 170 aa19.93■□□□□ 0.78
CLN6-204ENST00000564752 DPYSL4O14531 572 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 POLR2DO15514 142 aaKnown RBP19.92■□□□□ 0.78
CLN6-204ENST00000564752 TDGF1P13385 188 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 WNT7BP56706 349 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 VEPH1Q14D04 833 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 SV2CQ496J9 727 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 C1orf228Q6PIY5 440 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 DCP1BQ8IZD4 617 aaKnown RBP19.92■□□□□ 0.78
CLN6-204ENST00000564752 FAM200AQ8TCP9 573 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 SPPL2BQ8TCT7 592 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 RMDN1Q96DB5 314 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 MSANTD3Q96H12 275 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 EPC1Q9H2F5 836 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 TASP1Q9H6P5 420 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 C8orf33Q9H7E9 229 aaPredicted RBP19.92■□□□□ 0.78
CLN6-204ENST00000564752 TMEM206Q9H813 350 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 IL21Q9HBE4 155 aa19.92■□□□□ 0.78
CLN6-204ENST00000564752 LDHAP00338 332 aaKnown RBP19.91■□□□□ 0.78
CLN6-204ENST00000564752 HAPLN1P10915 354 aaPredicted RBP19.91■□□□□ 0.78
CLN6-204ENST00000564752 GARTP22102 1010 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 CDC25CP30307 473 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 PNPLA4P41247 253 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 RESP18Q5W5W9 173 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 BRSK2Q8IWQ3 736 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 SAAL1Q96ER3 474 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 ZNF560Q96MR9 790 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 CACNA1AO00555 2505 aa19.91■□□□□ 0.78
CLN6-204ENST00000564752 TSC2P49815 1807 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 PATJQ8NI35 1801 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 SCN1AP35498 2009 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 MYBPHLA2RUH7 354 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 SLC38A8A6NNN8 435 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 PRPF6O94906 941 aaKnown RBP19.9■□□□□ 0.78
CLN6-204ENST00000564752 SOX9P48436 509 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 KPNA1P52294 538 aaPredicted RBP19.9■□□□□ 0.78
CLN6-204ENST00000564752 NRLP54845 237 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 CYP4F8P98187 520 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 TFAMQ00059 246 aaKnown RBP19.9■□□□□ 0.78
CLN6-204ENST00000564752 PPP2R5DQ14738 602 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 ARHGAP29Q52LW3 1261 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 C1orf127Q8N9H9 656 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 GIPC2Q8TF65 315 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 CACTINQ8WUQ7 758 aaKnown RBP19.9■□□□□ 0.78
CLN6-204ENST00000564752 SLC46A2Q9BY10 475 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 RCOR1Q9UKL0 485 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 AGAP1Q9UPQ3 857 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 TCHHQ07283 1943 aa19.9■□□□□ 0.78
CLN6-204ENST00000564752 TULP1O00294 542 aaPredicted RBP19.89■□□□□ 0.77
CLN6-204ENST00000564752 PRAMEF12O95522 483 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 COL4A2P08572 1712 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 POLR2BP30876 1174 aaKnown RBP19.89■□□□□ 0.77
CLN6-204ENST00000564752 CCR3P51677 355 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 KRT85P78386 507 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 GAS6Q14393 721 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 TAF12Q16514 161 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 CNNM4Q6P4Q7 775 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 RALGPS2Q86X27 583 aaPredicted RBP19.89■□□□□ 0.77
CLN6-204ENST00000564752 CXorf38Q8TB03 319 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 HPS3Q969F9 1004 aa19.89■□□□□ 0.77
CLN6-204ENST00000564752 ZFYVE19Q96K21 471 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms