RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 AMPD3Q01432 767 aa5.56□□□□□ -1.52
CHD9-212ENST00000564641 NOGQ13253 232 aa5.56□□□□□ -1.52
CHD9-212ENST00000564641 EZH2Q15910 746 aaKnown RBP5.56□□□□□ -1.52
CHD9-212ENST00000564641 RBM20Q5T481 1227 aaKnown RBP5.56□□□□□ -1.52
CHD9-212ENST00000564641 ZNF551Q7Z340 670 aaPredicted RBP5.56□□□□□ -1.52
CHD9-212ENST00000564641 RASAL3Q86YV0 1011 aa5.56□□□□□ -1.52
CHD9-212ENST00000564641 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
CHD9-212ENST00000564641 WDR26Q9H7D7 661 aa5.56□□□□□ -1.52
CHD9-212ENST00000564641 FEZ2Q9UHY8 353 aaPredicted RBP5.56□□□□□ -1.52
CHD9-212ENST00000564641 COL3A1P02461 1466 aaPredicted RBP5.56□□□□□ -1.52
CHD9-212ENST00000564641 TNKSO95271 1327 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 SNUPNO95149 360 aaKnown RBP5.55□□□□□ -1.52
CHD9-212ENST00000564641 PDCP20941 246 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 DRD4P21917 467 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 HK3P52790 923 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 ODF1Q14990 250 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 ZNF618Q5T7W0 954 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 CEP85Q6P2H3 762 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 ZNF804AQ7Z570 1209 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 C1QL2Q7Z5L3 287 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 PPP1R32Q7Z5V6 425 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 FAM109AQ8N4B1 249 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 CPA6Q8N4T0 437 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 TBC1D5Q92609 795 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 DPF1Q92782 380 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 RGMAQ96B86 450 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 TINAGL1Q9GZM7 467 aaPredicted RBP5.55□□□□□ -1.52
CHD9-212ENST00000564641 SLAMF7Q9NQ25 335 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 ADAM21Q9UKJ8 722 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 CADPSQ9ULU8 1353 aa5.55□□□□□ -1.52
CHD9-212ENST00000564641 WASHC2CQ9Y4E1 1318 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 RHOP08100 348 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 EBLN1P0CF75 366 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 NDUFB7P17568 137 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 ALDH9A1P49189 494 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 GRM1Q13255 1194 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 FAM50AQ14320 339 aaKnown RBP5.54□□□□□ -1.52
CHD9-212ENST00000564641 TBCCQ15814 346 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 ANKRD16Q6P6B7 361 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 USP45Q70EL2 814 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 HEATR3Q7Z4Q2 680 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 USP37Q86T82 979 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 DTX2Q86UW9 622 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 GLCCI1Q86VQ1 547 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 PRR18Q8N4B5 295 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 CAMKK1Q8N5S9 505 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 SCARB1Q8WTV0 552 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 TNPO1Q92973 898 aaKnown RBP5.54□□□□□ -1.52
CHD9-212ENST00000564641 MRPL46Q9H2W6 279 aaKnown RBP5.54□□□□□ -1.52
CHD9-212ENST00000564641 SMOC2Q9H3U7 446 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 RNF7Q9UBF6 113 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 ABCF2Q9UG63 623 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 PCDHA3Q9Y5H8 950 aa5.54□□□□□ -1.52
CHD9-212ENST00000564641 TARM1B6A8C7 271 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 TLR5O60602 858 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 JTBO76095 146 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 ZRANB2O95218 330 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHD9-212ENST00000564641 ONECUT2O95948 504 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 FTLP02792 175 aaPredicted RBP5.53□□□□□ -1.52
CHD9-212ENST00000564641 HNRNPCP07910 306 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHD9-212ENST00000564641 FAM163BP0C2L3 166 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 VCAM1P19320 739 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 GCLCP48506 637 aaPredicted RBP5.53□□□□□ -1.52
CHD9-212ENST00000564641 ZNF81P51508 661 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 SRSF7Q16629 238 aaKnown RBP eCLIP5.53□□□□□ -1.52
CHD9-212ENST00000564641 FAM160B1Q5W0V3 765 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 ICE2Q659A1 982 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 C1orf43Q9BWL3 253 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 ARHGEF3Q9NR81 526 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.53□□□□□ -1.52
CHD9-212ENST00000564641 ZNF70Q9UC06 446 aaPredicted RBP5.53□□□□□ -1.52
CHD9-212ENST00000564641 SH2B3Q9UQQ2 575 aa5.53□□□□□ -1.52
CHD9-212ENST00000564641 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.53□□□□□ -1.52
CHD9-212ENST00000564641 LRRC14BA6NHZ5 514 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 KIF20AO95235 890 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 CERS1P27544 350 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 SLC29A4Q7RTT9 530 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 WDR53Q7Z5U6 358 aaPredicted RBP5.52□□□□□ -1.53
CHD9-212ENST00000564641 ZCRB1Q8TBF4 217 aaKnown RBP5.52□□□□□ -1.53
CHD9-212ENST00000564641 FBXO41Q8TF61 875 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 LMBRD1Q9NUN5 540 aa5.52□□□□□ -1.53
CHD9-212ENST00000564641 ZNF804BA4D1E1 1349 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 LOC105371045A0A1W2PR82 267 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 VPS4BO75351 444 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 ERBB2P04626 1255 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 POU2F2P09086 479 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 PIM1P11309 404 aaPredicted RBP5.51□□□□□ -1.53
CHD9-212ENST00000564641 TYRP14679 529 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 PHKA1P46020 1223 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 TFF2Q03403 129 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 PGS1Q32NB8 556 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 AMOTQ4VCS5 1084 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 SLC44A4Q53GD3 710 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 AARS2Q5JTZ9 985 aaKnown RBP5.51□□□□□ -1.53
CHD9-212ENST00000564641 EMC10Q5UCC4 262 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 LAYNQ6UX15 382 aa5.51□□□□□ -1.53
CHD9-212ENST00000564641 KLHDC4Q8TBB5 520 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms