RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 GSCP56915 257 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-210ENST00000564587 LCLAT1Q6UWP7 414 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 MMS22LQ6ZRQ5 1243 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 LIMS2Q7Z4I7 341 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 RASGEF1CQ8N431 466 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 SPATA4Q8NEY3 305 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 SPATA18Q8TC71 538 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 RUBCNQ92622 972 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 ADAM2Q99965 735 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 TRPV6Q9H1D0 765 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 TSPYL2Q9H2G4 693 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-210ENST00000564587 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 RSAD1Q9HA92 442 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.5■□□□□ 0.23
COMMD4-210ENST00000564587 ANAPC7Q9UJX3 599 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 OGDHLQ9ULD0 1010 aa16.5■□□□□ 0.23
COMMD4-210ENST00000564587 V9GYY5 206 aaPredicted RBP16.5■□□□□ 0.23
COMMD4-210ENST00000564587 ARHGEF37A1IGU5 675 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 O00370 1275 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 SPOPO43791 374 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 PARNO95453 639 aaKnown RBP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 CFHP08603 1231 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 COL6A1P12109 1028 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 SELPP16109 830 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 COMTP21964 271 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 CXCR5P32302 372 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 MAN1A1P33908 653 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 LILRA4P59901 499 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 PPP2R5EQ16537 467 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 GLE1Q53GS7 698 aaKnown RBP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 ARHGAP17Q68EM7 881 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 DNAJC24Q6P3W2 148 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 AGMOQ6ZNB7 445 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 CRYBG2Q8N1P7 616 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 C3orf20Q8ND61 904 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 C1orf131Q8NDD1 294 aaKnown RBP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 FEZF2Q8TBJ5 459 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 IPO4Q8TEX9 1081 aaKnown RBP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 TNIP3Q96KP6 325 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 UROC1Q96N76 676 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 TWNKQ96RR1 684 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 GAD1Q99259 594 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 CXCL16Q9H2A7 254 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 RGS18Q9NS28 235 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 IP6K2Q9UHH9 426 aa16.49■□□□□ 0.23
COMMD4-210ENST00000564587 PACSIN2Q9UNF0 486 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
COMMD4-210ENST00000564587 TARSL2A2RTX5 802 aaKnown RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 ARL5CA6NH57 179 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 CCDC188H7C350 402 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 PGRMC1O00264 195 aaKnown RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 PDE2AO00408 941 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 PPEF2O14830 753 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 INPPL1O15357 1258 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 DDX3YO15523 660 aaKnown RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 ATMINO43313 823 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 CEP104O60308 925 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 MICAL2O94851 1124 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 PROSCO94903 275 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 WARSP23381 471 aaKnown RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 GNL1P36915 607 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 MLH1P40692 756 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 SOX4Q06945 474 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 GRIK3Q13003 919 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 ZNF268Q14587 947 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 SOWAHAQ2M3V2 549 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 DENND1BQ6P3S1 775 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 SLC24A5Q71RS6 500 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 ECHDC2Q86YB7 292 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 TMEM86AQ8N2M4 240 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 WDTC1Q8N5D0 677 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 OR6B3Q8NGW1 331 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 TSC1Q92574 1164 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 C18orf8Q96DM3 657 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 PSMB7Q99436 277 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 MRPL45Q9BRJ2 306 aaKnown RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 RNF216Q9NWF9 866 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-210ENST00000564587 HESX1Q9UBX0 185 aa16.48■□□□□ 0.23
COMMD4-210ENST00000564587 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 A8MXQ7 604 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 M0QYV0 167 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 CCL5P13501 91 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 CTNNA1P35221 906 aaKnown RBP16.47■□□□□ 0.23
COMMD4-210ENST00000564587 GABRB2P47870 512 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 NAA30Q147X3 362 aaPredicted RBP16.47■□□□□ 0.23
COMMD4-210ENST00000564587 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 LRRC8DQ7L1W4 858 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 FAM126BQ8IXS8 530 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 GSTCDQ8NEC7 633 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 STK32AQ8WU08 396 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 CD101Q93033 1021 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 ZFP42Q96MM3 310 aa16.47■□□□□ 0.23
COMMD4-210ENST00000564587 DEFB118Q96PH6 123 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms