RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 WDR27A2RRH5 827 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 H7C4K7 107 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 AP5Z1O43299 807 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
KARS-204ENST00000564578 ATP2C2O75185 946 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 NOL4O94818 638 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 TPM2P07951 284 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 ACO1P21399 889 aaKnown RBP13.33□□□□□ -0.28
KARS-204ENST00000564578 NDUFV1P49821 464 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 CLCN4P51793 760 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 CDR1P51861 262 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 ROR1Q01973 937 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 GCNT1Q02742 428 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 RAB33AQ14088 237 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 SYCP1Q15431 976 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 DUSP6Q16828 381 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 FKBP15Q5T1M5 1219 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 UBR7Q8N806 425 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 VN1R2Q8NFZ6 395 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 OR6B3Q8NGW1 331 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 TWNKQ96RR1 684 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 EMILIN2Q9BXX0 1053 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 TLE6Q9H808 572 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 CISHQ9NSE2 258 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 APEX2Q9UBZ4 518 aa13.33□□□□□ -0.28
KARS-204ENST00000564578 AJAP1Q9UKB5 411 aaPredicted RBP13.33□□□□□ -0.28
KARS-204ENST00000564578 OR6C75A6NL08 312 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 EPHB6O15197 1021 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 CILPO75339 1184 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 ABLIM3O94929 683 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 VNN2O95498 520 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 ADH1AP07327 375 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 CD58P19256 250 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 KLRC2P26717 231 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 NDST1P52848 882 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 CREMQ03060 361 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 KLHDC7AQ5VTJ3 777 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 SLC22A17Q8WUG5 538 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 LPIN3Q9BQK8 851 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 OXCT2Q9BYC2 517 aaPredicted RBP13.32□□□□□ -0.28
KARS-204ENST00000564578 ZCWPW1Q9H0M4 648 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 DPEP3Q9H4B8 488 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
KARS-204ENST00000564578 TMLHEQ9NVH6 421 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 HCFC2Q9Y5Z7 792 aa13.32□□□□□ -0.28
KARS-204ENST00000564578 MYBPHLA2RUH7 354 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 A8MXQ7 604 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 TGM5O43548 720 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 GLP2RO95838 553 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 FOSL2P15408 326 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 TBXAS1P24557 533 aaPredicted RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 UBASH3AP57075 661 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 GPR17Q13304 367 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 ORC1Q13415 861 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 FAM171BQ6P995 826 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 RNF19BQ6ZMZ0 732 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 ZNF461Q8TAF7 563 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 SNX25Q9H3E2 840 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 PLCB1Q9NQ66 1216 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 CRTAC1Q9NQ79 661 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 BARX2Q9UMQ3 279 aaPredicted RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 LINC01565O15544 149 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 SPATA31D3P0C874 917 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 UCHL3P15374 230 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 EPCAMP16422 314 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 PCSK1P29120 753 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 PBX1P40424 430 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 ARPP19P56211 112 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 PSMC1P62191 440 aaKnown RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 CTC1Q2NKJ3 1217 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 INTS6LQ5JSJ4 861 aaKnown RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 SPATA31D4Q6ZUB0 917 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 UNC93AQ86WB7 457 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 CRYBG2Q8N1P7 616 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 LSM14BQ9BX40 385 aaKnown RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 NAA15Q9BXJ9 866 aaKnown RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 GANQ9H2C0 597 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 CRISPLD1Q9H336 500 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 FAM207AQ9NSI2 230 aaPredicted RBP13.31□□□□□ -0.28
KARS-204ENST00000564578 CDH9Q9ULB4 789 aa13.31□□□□□ -0.28
KARS-204ENST00000564578 RNF225M0QZC1 329 aaPredicted RBP13.3□□□□□ -0.28
KARS-204ENST00000564578 ATF2P15336 505 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 SLC39A12Q504Y0 691 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 ZNF394Q53GI3 561 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 IQCEQ6IPM2 695 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 ACOT1Q86TX2 421 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 MICALL1Q8N3F8 863 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 C12orf29Q8N999 325 aa13.3□□□□□ -0.28
KARS-204ENST00000564578 ATAD1Q8NBU5 361 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms