RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 SNX9Q9Y5X1 595 aa13.65□□□□□ -0.22
HERC2-206ENST00000564519 DOCK6Q96HP0 2047 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 DOCK8Q8NF50 2099 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 MYO10Q9HD67 2058 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 ZNF197O14709 1029 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 ATF6P18850 670 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 FCARP24071 287 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 ACAT1P24752 427 aaKnown RBP13.64□□□□□ -0.23
HERC2-206ENST00000564519 ALDH1A3P47895 512 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 CASP4P49662 377 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 SNRPFP62306 86 aaKnown RBP13.64□□□□□ -0.23
HERC2-206ENST00000564519 CYP24A1Q07973 514 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 PLD1Q13393 1074 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 PSMD6Q15008 389 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 SURF1Q15526 300 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 TEAD2Q15562 447 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 DUOXA2Q1HG44 320 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 FAM78AQ5JUQ0 283 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 CYP4A22Q5TCH4 519 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 KRBA2Q6ZNG9 492 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 WDR49Q8IV35 697 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 C12orf56Q8IXR9 622 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 ZNF516Q92618 1163 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 SHDQ96IW2 340 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 KIAA1586Q9HCI6 787 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 ZNF334Q9HCZ1 680 aaPredicted RBP13.64□□□□□ -0.23
HERC2-206ENST00000564519 ARHGEF3Q9NR81 526 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 SLC2A4RGQ9NR83 387 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 GDAP2Q9NXN4 497 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 DDX43Q9NXZ2 648 aaKnown RBP13.64□□□□□ -0.23
HERC2-206ENST00000564519 SIT1Q9Y3P8 196 aa13.64□□□□□ -0.23
HERC2-206ENST00000564519 DMDP11532 3685 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 SCN1AP35498 2009 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 A0A1W2PRU2 124 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 EXOC3O60645 756 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 HUS1O60921 280 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 MICAL2O94851 1124 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 CST3P01034 146 aaPredicted RBP13.63□□□□□ -0.23
HERC2-206ENST00000564519 TNNC2P02585 160 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 RPN1P04843 607 aaKnown RBP13.63□□□□□ -0.23
HERC2-206ENST00000564519 DCNP07585 359 aaKnown RBP13.63□□□□□ -0.23
HERC2-206ENST00000564519 HAPLN1P10915 354 aaPredicted RBP13.63□□□□□ -0.23
HERC2-206ENST00000564519 GPR15P49685 360 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 EPHB3P54753 998 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 SOWAHAQ2M3V2 549 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 MGAT5BQ3V5L5 792 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 STXBP5Q5T5C0 1151 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 TRAPPC11Q7Z392 1133 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
HERC2-206ENST00000564519 GIPC2Q8TF65 315 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 HPDLQ96IR7 371 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 CGRRF1Q99675 332 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 KCTD10Q9H3F6 313 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 ABI2Q9NYB9 513 aaPredicted RBP13.63□□□□□ -0.23
HERC2-206ENST00000564519 HSFX1Q9UBD0 423 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 NCANO14594 1321 aa13.63□□□□□ -0.23
HERC2-206ENST00000564519 ECI2O75521 394 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 ZNF202O95125 648 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 MYL1P05976 194 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 TNNI1P19237 187 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 DPYDQ12882 1025 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 PSMD2Q13200 908 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 INTS6LQ5JSJ4 861 aaKnown RBP13.62□□□□□ -0.23
HERC2-206ENST00000564519 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 LIMS2Q7Z4I7 341 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 DCP1BQ8IZD4 617 aaKnown RBP13.62□□□□□ -0.23
HERC2-206ENST00000564519 ADGRF2Q8IZF7 708 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 TOP6BLQ8N6T0 577 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 LEMD2Q8NC56 503 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 FAM200AQ8TCP9 573 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 KBTBD7Q8WVZ9 684 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 PSMG2Q969U7 264 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 ELSPBP1Q96BH3 223 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 ASB16Q96NS5 453 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 FNBP1Q96RU3 617 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 PKMYT1Q99640 499 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 PI4K2AQ9BTU6 479 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 CGNQ9P2M7 1197 aaKnown RBP13.62□□□□□ -0.23
HERC2-206ENST00000564519 NME7Q9Y5B8 376 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 R4GN57 208 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 COL4A3Q01955 1670 aa13.62□□□□□ -0.23
HERC2-206ENST00000564519 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 GABRDO14764 452 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 LMO2P25791 158 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 VIPR2P41587 438 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 TUFMP49411 452 aaKnown RBP13.61□□□□□ -0.23
HERC2-206ENST00000564519 NUCB2P80303 420 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 MYL7Q01449 175 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 TSPY1Q01534 308 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 MYO1EQ12965 1108 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
HERC2-206ENST00000564519 GRM2Q14416 872 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 SDHAF4Q5VUM1 108 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 GAREM2Q75VX8 874 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 GPIHBP1Q8IV16 184 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 C1orf210Q8IVY1 113 aa13.61□□□□□ -0.23
HERC2-206ENST00000564519 TMEM86AQ8N2M4 240 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms