RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 PUF60Q9UHX1 559 aaKnown RBP4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 DENND2AQ9ULE3 1009 aa4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 SMC3Q9UQE7 1217 aa4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 PCDHA9Q9Y5H5 950 aa4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 ASTN2O75129 1339 aaPredicted RBP4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 MYPNQ86TC9 1320 aa4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 COL6A3P12111 3177 aa4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 HTTP42858 3142 aa4.35□□□□□ -1.71
ATP2A1-207ENST00000564470 TRBV23-1A0A0A0MS06 115 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 CCL15-CCL14A0A0B4J2E2 113 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 GSG1L2A8MUP6 293 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 SNAP23O00161 211 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 WNT10BO00744 389 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF213O14771 459 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 TBX3O15119 743 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ARHGAP6O43182 974 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 GPAA1O43292 621 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 STX6O43752 255 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 DHX16O60231 1041 aaKnown RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 TLR2O60603 784 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF202O95125 648 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 MCM5P33992 734 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 GJA4P35212 333 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 RPS19P39019 145 aaKnown RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 DNM2P50570 870 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 JAM2P57087 298 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 IL13RA1P78552 427 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 RAPGEF1Q13905 1077 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 NFE2Q16621 373 aaPredicted RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 TBR1Q16650 682 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 CCL15Q16663 113 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 CAVIN4Q5BKX8 364 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 FAM209AQ5JX71 171 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 IGFL4Q6B9Z1 124 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 TTLL5Q6EMB2 1281 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 USP30Q70CQ3 517 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 LARP4Q71RC2 724 aaKnown RBP eCLIP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 CXXC5Q7LFL8 322 aaKnown RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 OTOP2Q7RTS6 562 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 UBE2Q1Q7Z7E8 422 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ZC3H7AQ8IWR0 971 aaKnown RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 MB21D2Q8IYB1 491 aaPredicted RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 TBC1D16Q8TBP0 767 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 GTF3C6Q969F1 213 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 SNX27Q96L92 541 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 PLEKHG4BQ96PX9 1271 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 KIAA1683Q9H0B3 1180 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 RSPH9Q9H1X1 276 aaPredicted RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 PPCSQ9HAB8 311 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 UCKL1Q9NWZ5 548 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 PFDN2Q9UHV9 154 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 INTUQ9ULD6 942 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 CBLCQ9ULV8 474 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 MTMR6Q9Y217 621 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 LZTS1Q9Y250 596 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ATP6V1DQ9Y5K8 247 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ADGRA2Q96PE1 1338 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ZNF532Q9HCE3 1301 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 COL4A1P02462 1669 aa4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 DDX60LQ5H9U9 1706 aaKnown RBP4.34□□□□□ -1.71
ATP2A1-207ENST00000564470 ZSWIM8A7E2V4 1837 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 ARAP2Q8WZ64 1704 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 COL2A1P02458 1487 aaPredicted RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 XDHP47989 1333 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 SALL1Q9NSC2 1324 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 FAM221BA6H8Z2 402 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 MATN2O00339 956 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 PDPK1O15530 556 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 IDH1O75874 414 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 LARGE1O95461 756 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 SGPL1O95470 568 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 TFRCP02786 760 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 C4BPAP04003 597 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 FAM163BP0C2L3 166 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 VDRP11473 427 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 PCP11498 1178 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 CETPP11597 493 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 FOSL2P15408 326 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 NAT1P18440 290 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 GJB2P29033 226 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 PDIA3P30101 505 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 HIBADHP31937 336 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 MC4RP32245 332 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 MCM7P33993 719 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 LIFRP42702 1097 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 CDKN1CP49918 316 aaPredicted RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 MEOX1P50221 254 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 SUMO1P63165 101 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 GPSM2P81274 684 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 HMGN5P82970 282 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 SSRP1Q08945 709 aaKnown RBP4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 FOXL1Q12952 345 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 PCOLCEQ15113 449 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 LRRC41Q15345 812 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 CCDC96Q2M329 555 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 FAM47CQ5HY64 1035 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 STRIP1Q5VSL9 837 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 FOXB2Q5VYV0 432 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 ATL3Q6DD88 541 aa4.33□□□□□ -1.72
ATP2A1-207ENST00000564470 NAA16Q6N069 864 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms