RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SFMBT2Q5VUG0 894 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 SCARA5Q6ZMJ2 495 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 TMC7Q7Z402 723 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 RBM23Q86U06 439 aaKnown RBP18.11■□□□□ 0.49
CMTM3-208ENST00000564247 TMEM173Q86WV6 379 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-208ENST00000564247 APPL2Q8NEU8 664 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 SENP8Q96LD8 212 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 CDCA3Q99618 268 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-208ENST00000564247 ENTPD7Q9NQZ7 604 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 CACNG4Q9UBN1 327 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 PRG3Q9Y2Y8 225 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-208ENST00000564247 PCDHB4Q9Y5E5 795 aa18.11■□□□□ 0.49
CMTM3-208ENST00000564247 GRXCR2A6NFK2 248 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 RNF225M0QZC1 329 aaPredicted RBP18.1■□□□□ 0.49
CMTM3-208ENST00000564247 SPTLC1O15269 473 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 TBX10O75333 385 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 KRT5P13647 590 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 ASPAP45381 313 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 DUSP6Q16828 381 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 PLPP4Q5VZY2 271 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 PTCRAQ6ISU1 281 aaPredicted RBP18.1■□□□□ 0.49
CMTM3-208ENST00000564247 PDXDC1Q6P996 788 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 DDX53Q86TM3 631 aaKnown RBP18.1■□□□□ 0.49
CMTM3-208ENST00000564247 TOP6BLQ8N6T0 577 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 BAP1Q92560 729 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 SYN2Q92777 582 aaPredicted RBP18.1■□□□□ 0.49
CMTM3-208ENST00000564247 KAT5Q92993 513 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 BCO2Q9BYV7 579 aa18.1■□□□□ 0.49
CMTM3-208ENST00000564247 LRRC53A6NM62 1247 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 HIDE1A8MVS5 230 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 TNFRSF10AO00220 468 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 FOXN3O00409 490 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 PER2O15055 1255 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 NRDCO43847 1150 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 TACC1O75410 805 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 KIF4AO95239 1232 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 ODC1P11926 461 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 FERP16591 822 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 CD58P19256 250 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 SOX5P35711 763 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 NDUFV1P49821 464 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 JAM2P57087 298 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 ELAVL2Q12926 359 aaKnown RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 SMC1AQ14683 1233 aaKnown RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 METTL23Q86XA0 190 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 VPS52Q8N1B4 723 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 TMEM86AQ8N2M4 240 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 MRPL43Q8N983 215 aaKnown RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 BCL7CQ8WUZ0 217 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 SHC3Q92529 594 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 NECAB3Q96P71 396 aaPredicted RBP18.09■□□□□ 0.49
CMTM3-208ENST00000564247 PANX2Q96RD6 677 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 ZBP1Q9H171 429 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 SNX25Q9H3E2 840 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 CISHQ9NSE2 258 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 STK39Q9UEW8 545 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 DSEQ9UL01 958 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 FAM50BQ9Y247 325 aa18.09■□□□□ 0.49
CMTM3-208ENST00000564247 F8VZ95 297 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 GLP2RO95838 553 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 IL9P15248 144 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 AARSP49588 968 aaKnown RBP eCLIP18.08■□□□□ 0.48
CMTM3-208ENST00000564247 CDH8P55286 799 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 BPIFB4P59827 614 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 ASIC2Q16515 512 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 TC2NQ8N9U0 490 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 C3orf58Q8NDZ4 430 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 HASPINQ8TF76 798 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 MSLNLQ96KJ4 702 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 SUSD3Q96L08 255 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 DNAJC7Q99615 494 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 ARID3AQ99856 593 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 SMYD3Q9H7B4 428 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 ABHD10Q9NUJ1 306 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 AIPL1Q9NZN9 384 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 CLEC1BQ9P126 229 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 AJAP1Q9UKB5 411 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-208ENST00000564247 BARX2Q9UMQ3 279 aaPredicted RBP18.08■□□□□ 0.48
CMTM3-208ENST00000564247 IRAK3Q9Y616 596 aa18.08■□□□□ 0.48
CMTM3-208ENST00000564247 C2orf71A6NGG8 1288 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 M0QZQ0 153 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 GFPT2O94808 682 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 CTSAP10619 480 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 ACO1P21399 889 aaKnown RBP18.07■□□□□ 0.48
CMTM3-208ENST00000564247 GNL1P36915 607 aaPredicted RBP18.07■□□□□ 0.48
CMTM3-208ENST00000564247 BRCC3P46736 316 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 ARID5AQ03989 594 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 GOLGA8FQ08AF8 430 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 GOLGA8DPQ0D2H9 430 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 KCNC3Q14003 757 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 SOWAHAQ2M3V2 549 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 TMEM270Q6UE05 265 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 CD300LGQ6UXG3 332 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 TMEM184AQ6ZMB5 413 aa18.07■□□□□ 0.48
CMTM3-208ENST00000564247 FAM71AQ8IYT1 594 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms