RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
SPG7-209ENST00000564047 AAASQ9NRG9 546 aa13.77□□□□□ -0.21
SPG7-209ENST00000564047 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
SPG7-209ENST00000564047 SF3B1O75533 1304 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPG7-209ENST00000564047 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 I3L4J1 428 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 GABRDO14764 452 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 SYN3O14994 580 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 CYP26A1O43174 497 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 NRDCO43847 1150 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 PAEPP09466 180 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 GNL1P36915 607 aaPredicted RBP13.76□□□□□ -0.21
SPG7-209ENST00000564047 PBX3P40426 434 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 LHX1P48742 406 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 NDST1P52848 882 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 RAD23BP54727 409 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 ARID5AQ03989 594 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 PTK2Q05397 1052 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 KLHL30Q0D2K2 578 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 AAK1Q2M2I8 961 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 WSCD1Q658N2 575 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 FUT10Q6P4F1 479 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 CYP26C1Q6V0L0 522 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 METTL23Q86XA0 190 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 TMTC1Q8IUR5 882 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 SLC39A11Q8N1S5 342 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 COLGALT1Q8NBJ5 622 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 OR6B3Q8NGW1 331 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 CLP1Q92989 425 aaKnown RBP13.76□□□□□ -0.21
SPG7-209ENST00000564047 TMEM176AQ96HP8 235 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 NT5C1AQ9BXI3 368 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 SNX25Q9H3E2 840 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 MSRAQ9UJ68 235 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 KIAA1257Q9ULG3 409 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 PYCARDQ9ULZ3 195 aa13.76□□□□□ -0.21
SPG7-209ENST00000564047 SSU72P8A0A1W2PR75 194 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 A8MXQ7 604 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 EFEMP2O95967 443 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 LINC00271P0C7V0 271 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 SKILP12757 684 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 CYP11B1P15538 503 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 ANXA13P27216 316 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 PPM1AP35813 382 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 PBX2P40425 430 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
SPG7-209ENST00000564047 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 OSTM1Q86WC4 334 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 TMEM173Q86WV6 379 aaPredicted RBP13.75□□□□□ -0.21
SPG7-209ENST00000564047 CRYBG2Q8N1P7 616 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 SLC4A11Q8NBS3 891 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 EPS8L1Q8TE68 723 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 BCL7CQ8WUZ0 217 aaPredicted RBP13.75□□□□□ -0.21
SPG7-209ENST00000564047 NECAB3Q96P71 396 aaPredicted RBP13.75□□□□□ -0.21
SPG7-209ENST00000564047 CHP1Q99653 195 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 ELOVL4Q9GZR5 314 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 SPG21Q9NZD8 308 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 ARHGAP20Q9P2F6 1191 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 PCDHB12Q9Y5F1 795 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 TIMM13Q9Y5L4 95 aaPredicted RBP13.75□□□□□ -0.21
SPG7-209ENST00000564047 GBF1Q92538 1859 aa13.75□□□□□ -0.21
SPG7-209ENST00000564047 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 GRXCR1A8MXD5 290 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 FGFR3P22607 806 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 GNA15P30679 374 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 PDE6CP51160 858 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 CCZ1BP86790 482 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 CCZ1P86791 482 aaPredicted RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 YWHAHQ04917 246 aaPredicted RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 ADGRE1Q14246 886 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 RAB30Q15771 203 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 TDRD12Q587J7 1177 aaKnown RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 FAM171A1Q5VUB5 890 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 NOP9Q86U38 636 aaKnown RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 SLC47A2Q86VL8 602 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 ZNF677Q86XU0 584 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 CCDC170Q8IYT3 715 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 THEM5Q8N1Q8 247 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 TMEM169Q96HH4 297 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 TNIP3Q96KP6 325 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 TWNKQ96RR1 684 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 SYT11Q9BT88 431 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 LRFN3Q9BTN0 628 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 KCND1Q9NSA2 647 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 STK39Q9UEW8 545 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 NOCTQ9UK39 431 aaKnown RBP13.74□□□□□ -0.21
SPG7-209ENST00000564047 RWDD3Q9Y3V2 267 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 NME7Q9Y5B8 376 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 PCDHA11Q9Y5I1 949 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 SCN1AP35498 2009 aa13.74□□□□□ -0.21
SPG7-209ENST00000564047 LCHNA4D1U4 455 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms