RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 GIPC2Q8TF65 315 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 MRPS31Q92665 395 aaKnown RBP10.29□□□□□ -0.76
CLN6-203ENST00000563917 SAAL1Q96ER3 474 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 ANKRD36BP1Q96IX9 119 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 CRISPLD1Q9H336 500 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 ITGA11Q9UKX5 1188 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
CLN6-203ENST00000563917 EXTL3O43909 919 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 PRPF40AO75400 957 aaKnown RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 PPP1R37O75864 691 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 VNN2O95498 520 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 ITGB3P05106 788 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 CSH1P0DML2 217 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 CSH2P0DML3 217 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 HAPLN1P10915 354 aaPredicted RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 PDIA4P13667 645 aaKnown RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 DDX6P26196 483 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLN6-203ENST00000563917 PCSK1P29120 753 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 WEE1P30291 646 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 ADSSP30520 456 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 POLR2BP30876 1174 aaKnown RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 LHX1P48742 406 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 PUM1Q14671 1186 aaKnown RBP eCLIP10.28□□□□□ -0.76
CLN6-203ENST00000563917 STXBP5Q5T5C0 1151 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 FAM173BQ6P4H8 233 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 TSSK4Q6SA08 328 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 GPIHBP1Q8IV16 184 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 GPD1LQ8N335 351 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 SPEM1Q8N4L4 309 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 CSGALNACT2Q8N6G5 542 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 TTC9BQ8N6N2 239 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 LRRC52Q8N7C0 313 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 ZBTB44Q8NCP5 570 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 DNAJC19Q96DA6 116 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 USP28Q96RU2 1077 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 LPIN3Q9BQK8 851 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 LRRC3Q9BY71 257 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 TNMDQ9H2S6 317 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 CUEDC2Q9H467 287 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 KIAA1586Q9HCI6 787 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 PRMT8Q9NR22 394 aaPredicted RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
CLN6-203ENST00000563917 DDX43Q9NXZ2 648 aaKnown RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 UXTQ9UBK9 157 aaPredicted RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 MAGED2Q9UNF1 606 aaPredicted RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 SMG5Q9UPR3 1016 aaKnown RBP10.28□□□□□ -0.76
CLN6-203ENST00000563917 TCHHQ07283 1943 aa10.27□□□□□ -0.76
CLN6-203ENST00000563917 GOLGA8IPA6NC78 632 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 ZNF233A6NK53 670 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 GOLGA8JA6NMD2 632 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SOBPA7XYQ1 873 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 K7ELQ4 463 aaPredicted RBP10.27□□□□□ -0.77
CLN6-203ENST00000563917 SPTLC2O15270 562 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 CYP4F8P98187 520 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 ITPRIPL2Q3MIP1 535 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 POTEHQ6S545 545 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 CRELD2Q6UXH1 353 aaPredicted RBP10.27□□□□□ -0.77
CLN6-203ENST00000563917 PRR23BQ6ZRT6 265 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 DGLUCYQ7Z3D6 616 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SPATA2LQ8IUW3 424 aaPredicted RBP10.27□□□□□ -0.77
CLN6-203ENST00000563917 EFCAB13Q8IY85 973 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 CMTM8Q8IZV2 173 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 DCLK2Q8N568 766 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 FSIP1Q8NA03 581 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 IQUBQ8NA54 791 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SUMF1Q8NBK3 374 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 TTC8Q8TAM2 541 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SPATA18Q8TC71 538 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 ACBD6Q9BR61 282 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 STRA6Q9BX79 667 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 EPC1Q9H2F5 836 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 PCIF1Q9H4Z3 704 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 KIF9Q9HAQ2 790 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 USP18Q9UMW8 372 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 SNX9Q9Y5X1 595 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 MORC2Q9Y6X9 1032 aaPredicted RBP10.27□□□□□ -0.77
CLN6-203ENST00000563917 TICRRQ7Z2Z1 1910 aa10.27□□□□□ -0.77
CLN6-203ENST00000563917 PATJQ8NI35 1801 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 MYBPHLA2RUH7 354 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 PRR5-ARHGAP8B1AHC4 643 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 ATG13O75143 517 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 PRPF6O94906 941 aaKnown RBP10.26□□□□□ -0.77
CLN6-203ENST00000563917 CLSTN1O94985 981 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 CHRNB1P11230 501 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 ATF6P18850 670 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 CTHP32929 405 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 CNR2P34972 360 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 NASPP49321 788 aaPredicted RBP10.26□□□□□ -0.77
CLN6-203ENST00000563917 PDE6CP51160 858 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 CDR1P51861 262 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 ASIC1P78348 528 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 ARHGAP8P85298 464 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 LMNB2Q03252 620 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 KCNA1Q09470 495 aa10.26□□□□□ -0.77
CLN6-203ENST00000563917 FZD5Q13467 585 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms