RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 VEPH1Q14D04 833 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 KMT5BQ4FZB7 885 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 POTEHQ6S545 545 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 DNAJB7Q7Z6W7 309 aaPredicted RBP13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 LRRTM3Q86VH5 581 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 DNASE1L2Q92874 299 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 CCDC47Q96A33 483 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 CCDC34Q96HJ3 373 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 HPDLQ96IR7 371 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 FNBP1Q96RU3 617 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 DDX23Q9BUQ8 820 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 KCTD10Q9H3F6 313 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 ZFP14Q9HCL3 533 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 TRPV5Q9NQA5 729 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 DDX43Q9NXZ2 648 aaKnown RBP13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 PCDHB5Q9Y5E4 795 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 SNX9Q9Y5X1 595 aa13.13□□□□□ -0.31
NSMCE1-204ENST00000563273 EXOC3O60645 756 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 RPN1P04843 607 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 KRT19P08727 400 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 MYL4P12829 197 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 CYP2J2P51589 502 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 DPYDQ12882 1025 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 KCNB1Q14721 858 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 NFIL3Q16649 462 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 SOWAHAQ2M3V2 549 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 INTS6LQ5JSJ4 861 aaKnown RBP13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 FAM78AQ5JUQ0 283 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 TANGO2Q6ICL3 276 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 CCDC105Q8IYK2 499 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 ADGRF2Q8IZF7 708 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 TTC9BQ8N6N2 239 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 FLCNQ8NFG4 579 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 SHKBP1Q8TBC3 707 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 FUBP3Q96I24 572 aaKnown RBP eCLIP13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 PKMYT1Q99640 499 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 OSBPL6Q9BZF3 934 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 GZF1Q9H116 711 aaPredicted RBP13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 VRTNQ9H8Y1 702 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 TBC1D17Q9HA65 648 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 SLC27A5Q9Y2P5 690 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 PIEZO1Q92508 2521 aa13.12□□□□□ -0.31
NSMCE1-204ENST00000563273 MYO10Q9HD67 2058 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 ANK1P16157 1881 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 SOBPA7XYQ1 873 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 MAPK13O15264 365 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 TACC1O75410 805 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 DLATP10515 647 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 ATF6P18850 670 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 TNNI1P19237 187 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 WARSP23381 471 aaKnown RBP13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 CDC25CP30307 473 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 ATICP31939 592 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 ENPEPQ07075 957 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 TEAD2Q15562 447 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 MGAT5BQ3V5L5 792 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 LMBRD2Q68DH5 695 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 GAREM2Q75VX8 874 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 RDH13Q8NBN7 331 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 SEPT5Q99719 369 aaPredicted RBP13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 OBP2AQ9NY56 170 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 CDH9Q9ULB4 789 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 CA14Q9ULX7 337 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 TRAF3IP3Q9Y228 551 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 NOTCH4Q99466 2003 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 TSC2P49815 1807 aa13.11□□□□□ -0.31
NSMCE1-204ENST00000563273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 A0A1W2PRU2 124 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 NRG2O14511 850 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 PI15O43692 258 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 ZNF202O95125 648 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 CSH1P0DML2 217 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 CSH2P0DML3 217 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 PSMC3P17980 439 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 MAGEA11P43364 429 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 MLLT6P55198 1093 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 RPL10AP62906 217 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 MAPRE1Q15691 268 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 MLF2Q15773 248 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 ARHGAP15Q53QZ3 475 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 SCARA3Q6AZY7 606 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 FAM171BQ6P995 826 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 OSTM1Q86WC4 334 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 MFSD6LQ8IWD5 586 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 GUF1Q8N442 669 aaKnown RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 ZSCAN18Q8TBC5 510 aaPredicted RBP13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 TMC2Q8TDI7 906 aa13.1□□□□□ -0.31
NSMCE1-204ENST00000563273 PARD3BQ8TEW8 1205 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms