RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 CDH9Q9ULB4 789 aa20.09■□□□□ 0.81
RAB40C-207ENST00000563109 BARX2Q9UMQ3 279 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-207ENST00000563109 SIK3Q9Y2K2 1263 aa20.09■□□□□ 0.81
RAB40C-207ENST00000563109 STXBP5LQ9Y2K9 1186 aa20.09■□□□□ 0.81
RAB40C-207ENST00000563109 PLXNA3P51805 1871 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 A0A1W2PQC6 194 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 CLASP2O75122 1294 aaKnown RBP20.08■□□□□ 0.81
RAB40C-207ENST00000563109 PDGFRBP09619 1106 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 ACAT1P24752 427 aaKnown RBP20.08■□□□□ 0.81
RAB40C-207ENST00000563109 NRIP1P48552 1158 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 ROR1Q01973 937 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 NR1I3Q14994 352 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 DUSP6Q16828 381 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 TCEAL5Q5H9L2 206 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 INTS6LQ5JSJ4 861 aaKnown RBP20.08■□□□□ 0.81
RAB40C-207ENST00000563109 RBM23Q86U06 439 aaKnown RBP20.08■□□□□ 0.81
RAB40C-207ENST00000563109 JAKMIP2Q96AA8 810 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 TNIP3Q96KP6 325 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 ZCWPW1Q9H0M4 648 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 SIX2Q9NPC8 291 aa20.08■□□□□ 0.81
RAB40C-207ENST00000563109 FAM207AQ9NSI2 230 aaPredicted RBP20.08■□□□□ 0.81
RAB40C-207ENST00000563109 CILPO75339 1184 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 GLUD1P00367 558 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 SRGAP2BP0DMP2 458 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 KLK7P49862 253 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 NDST1P52848 882 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 APBA1Q02410 837 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 RAB33AQ14088 237 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 MAPRE1Q15691 268 aaKnown RBP20.07■□□□□ 0.8
RAB40C-207ENST00000563109 ARHGAP44Q17R89 818 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 UVSSAQ2YD98 709 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 KLHDC7AQ5VTJ3 777 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 GJB7Q6PEY0 223 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 ELMSAN1Q6PJG2 1045 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 RSPO2Q6UXX9 243 aaPredicted RBP20.07■□□□□ 0.8
RAB40C-207ENST00000563109 KAT5Q92993 513 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 NT5C1AQ9BXI3 368 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 XPO4Q9C0E2 1151 aaKnown RBP20.07■□□□□ 0.8
RAB40C-207ENST00000563109 CHD7Q9P2D1 2997 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 DNAJC12Q9UKB3 198 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 PCDHB4Q9Y5E5 795 aa20.07■□□□□ 0.8
RAB40C-207ENST00000563109 PER2O15055 1255 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 ADAM12O43184 909 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 HCRTO43612 131 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 OR4Q2P0C623 313 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 UCHL3P15374 230 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 LMO2P25791 158 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 PSMC1P62191 440 aaKnown RBP20.06■□□□□ 0.8
RAB40C-207ENST00000563109 SMARCB1Q12824 385 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 RAPGEF1Q13905 1077 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 NFE2Q16621 373 aaPredicted RBP20.06■□□□□ 0.8
RAB40C-207ENST00000563109 SLC39A12Q504Y0 691 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 TPGS2Q68CL5 300 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 IQCEQ6IPM2 695 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 SARM1Q6SZW1 724 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 PALB2Q86YC2 1186 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 B3GALNT2Q8NCR0 500 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 KREMEN1Q96MU8 473 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 TMEM209Q96SK2 561 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 GANQ9H2C0 597 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 HMGXB4Q9UGU5 601 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 DPP7Q9UHL4 492 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 FHOD1Q9Y613 1164 aa20.06■□□□□ 0.8
RAB40C-207ENST00000563109 WDR27A2RRH5 827 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 C1RP00736 705 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 KRT5P13647 590 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 CLCN4P51793 760 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 GPR17Q13304 367 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 SMYD5Q6GMV2 418 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 TMEM270Q6UE05 265 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 C4orf50Q6ZRC1 276 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 UBR7Q8N806 425 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 ZNF461Q8TAF7 563 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 TRIM5Q9C035 493 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 DPEP3Q9H4B8 488 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 IGFLR1Q9H665 355 aa20.05■□□□□ 0.8
RAB40C-207ENST00000563109 AFF4Q9UHB7 1163 aaKnown RBP20.05■□□□□ 0.8
RAB40C-207ENST00000563109 ATP8B3O60423 1300 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 TGM5O43548 720 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 NCK2O43639 380 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 PTPN1P18031 435 aaKnown RBP20.04■□□□□ 0.8
RAB40C-207ENST00000563109 ELF1P32519 619 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 USP8P40818 1118 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 POLR2FP61218 127 aaKnown RBP20.04■□□□□ 0.8
RAB40C-207ENST00000563109 HYAL1Q12794 435 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 ORC1Q13415 861 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 ZNF394Q53GI3 561 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 MDH1BQ5I0G3 518 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 LIN9Q5TKA1 542 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 LLGL2Q6P1M3 1020 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 CACNA2D4Q7Z3S7 1137 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 ACOT1Q86TX2 421 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 EFHBQ8N7U6 833 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 RBBP8NLQ8NC74 664 aaPredicted RBP20.04■□□□□ 0.8
RAB40C-207ENST00000563109 C2orf15Q8WU43 125 aaKnown RBP20.04■□□□□ 0.8
RAB40C-207ENST00000563109 TMEM176AQ96HP8 235 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 PGLYRP2Q96PD5 576 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 MAFFQ9ULX9 164 aa20.04■□□□□ 0.8
RAB40C-207ENST00000563109 NME7Q9Y5B8 376 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms