RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 TRDMT1O14717 391 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 ATF6P18850 670 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 ZNF131P52739 623 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 TNK2Q07912 1038 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 RUNX3Q13761 415 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 FBXO43Q4G163 708 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 ARSHQ5FYA8 562 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 SLFN12LQ6IEE8 588 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 MYCT1Q8N699 235 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 CALML4Q96GE6 196 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 ZC3H10Q96K80 434 aaKnown RBP17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 LPIN3Q9BQK8 851 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 FAM83CQ9BQN1 747 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 REEP2Q9BRK0 252 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 SLC46A2Q9BY10 475 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 GKN1Q9NS71 199 aa17.03■□□□□ 0.32
HERPUD1-205ENST00000562914 VWA3AA6NCI4 1184 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 PPEF2O14830 753 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 EXTL3O43909 919 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 TRAK2O60296 914 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 SOAT2O75908 522 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 FAM13AO94988 1023 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 CCDC192P0DO97 292 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 DRD1P21728 446 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 TAF6P49848 677 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 SHC2P98077 582 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 CYP4F8P98187 520 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 BFSP1Q12934 665 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 NT5DC4Q86YG4 428 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 GPIHBP1Q8IV16 184 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 FAM212AQ96EL1 285 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 ARRDC1-AS1Q9H2J1 176 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 C2orf42Q9NWW7 574 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 RALGAPA1Q6GYQ0 2036 aa17.02■□□□□ 0.32
HERPUD1-205ENST00000562914 CYB561D2O14569 222 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 TM4SF5O14894 197 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 AXIN1O15169 862 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 NFICP08651 508 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 PMLP29590 882 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 GTF2BQ00403 316 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 ZNF268Q14587 947 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 PDGFRLQ15198 375 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 MCTP1Q6DN14 999 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 CCDC26Q8TAB7 109 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 PLIN2Q99541 437 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 TDP1Q9NUW8 608 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 UXTQ9UBK9 157 aaPredicted RBP17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 GREB1Q4ZG55 1949 aa17.01■□□□□ 0.31
HERPUD1-205ENST00000562914 TSC2P49815 1807 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 CSH1P0DML2 217 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 CSH2P0DML3 217 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 UBA7P41226 1012 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 PNPLA4P41247 253 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 NLRP12P59046 1061 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 TSPY1Q01534 308 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
HERPUD1-205ENST00000562914 NFE2Q16621 373 aaPredicted RBP17■□□□□ 0.31
HERPUD1-205ENST00000562914 SV2CQ496J9 727 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 PLA2G2CQ5R387 149 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 FSTL4Q6MZW2 842 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 TMEM130Q8N3G9 435 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 MRPS31Q92665 395 aaKnown RBP17■□□□□ 0.31
HERPUD1-205ENST00000562914 ZNF560Q96MR9 790 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 PYM1Q9BRP8 204 aaKnown RBP17■□□□□ 0.31
HERPUD1-205ENST00000562914 ST6GALNAC4Q9H4F1 302 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 DPP3Q9NY33 737 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 KIF26AQ9ULI4 1882 aaPredicted RBP17■□□□□ 0.31
HERPUD1-205ENST00000562914 PCDHB5Q9Y5E4 795 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 STYXL1Q9Y6J8 313 aa17■□□□□ 0.31
HERPUD1-205ENST00000562914 TBCAO75347 108 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 BMP15O95972 392 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 F11P03951 625 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 SF3A2Q15428 464 aaKnown RBP16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 ELF2Q15723 593 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 STPG1Q5TH74 334 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 KBTBD6Q86V97 674 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 C11orf74Q86VG3 221 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 MON1AQ86VX9 555 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 MAB21L3Q8N8X9 362 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 GIPC2Q8TF65 315 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 LEO1Q8WVC0 666 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 ABCB6Q9NP58 842 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 HPS4Q9NQG7 708 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 ABI2Q9NYB9 513 aaPredicted RBP16.99■□□□□ 0.31
HERPUD1-205ENST00000562914 KPNA7A9QM74 516 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 RHOBTB1O94844 696 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 IL18RAPO95256 599 aa16.98■□□□□ 0.31
HERPUD1-205ENST00000562914 SEC24BO95487 1268 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms