RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SPP2Q13103 211 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 PDK4Q16654 411 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 RINT1Q6NUQ1 792 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 DLK2Q6UY11 383 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 PHLDB2Q86SQ0 1253 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 FAM161BQ96MY7 647 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 UNC45AQ9H3U1 944 aa14.77□□□□□ -0.05
GTF3C1-203ENST00000562609 A8MXQ7 604 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 TP73O15350 636 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 CHRNB2P17787 502 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 PON1P27169 355 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 PGM1P36871 562 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 CETN2P41208 172 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 PTGER2P43116 358 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 FYB2Q5VWT5 728 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 GJB7Q6PEY0 223 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 IRGQQ8WZA9 623 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 PWWP2AQ96N64 755 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 PFDN4Q9NQP4 134 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 ACTL7BQ9Y614 415 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 IPO5O00410 1097 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 TMEM253P0C7T8 217 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 PAX3P23760 479 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 ANXA13P27216 316 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 CASP4P49662 377 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 MARSP56192 900 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 MED21Q13503 144 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 ITGA9Q13797 1035 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 FOXR2Q6PJQ5 311 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 RBM44Q6ZP01 1051 aaKnown RBP14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 TRIM67Q6ZTA4 783 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 FAM160B2Q86V87 743 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 NDUFA13Q9P0J0 144 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 SYNPO2Q9UMS6 1093 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 ALG6Q9Y672 507 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 NCANO14594 1321 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 ATP8B3O60423 1300 aa14.76□□□□□ -0.05
GTF3C1-203ENST00000562609 TMEM110-MUSTN1A8MSY1 372 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 VILLO15195 856 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 TCEA3O75764 348 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 GAS8O95995 478 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 EIF2AK2P19525 551 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 EMP3P54852 163 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 OVGP1Q12889 678 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 DCTN2Q13561 401 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 LRRC36Q1X8D7 754 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 RGS9BPQ6ZS82 235 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 RASSF3Q86WH2 238 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 SLC15A3Q8IY34 581 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 MYCT1Q8N699 235 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 GAB3Q8WWW8 586 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 PRR11Q96HE9 360 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 NINJ2Q9NZG7 142 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 HEY2Q9UBP5 337 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 SUN2Q9UH99 717 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 ASIC3Q9UHC3 531 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 ZNF180Q9UJW8 692 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 TMEM150BA6NC51 233 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 ICAM1P05362 532 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 ESRRAP11474 423 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 HOXD12P35452 270 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 CCDC80Q76M96 950 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 DENND1AQ8TEH3 1009 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 POLR3CQ9BUI4 534 aaPredicted RBP14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 KCNH7Q9NS40 1196 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 COG5Q9UP83 839 aa14.75□□□□□ -0.05
GTF3C1-203ENST00000562609 A0A0G2JND7 137 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 FGFR1P11362 822 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 LLGL1Q15334 1064 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 KNOP1Q1ED39 458 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 DCAF17Q5H9S7 520 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 LRRC8BQ6P9F7 803 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 RAPH1Q70E73 1250 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 UBL4BQ8N7F7 174 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 RFWD2Q8NHY2 731 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 DIS3LQ8TF46 1054 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 SLC5A5Q92911 643 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 HSPBAP1Q96EW2 488 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 TUBB6Q9BUF5 446 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 THAP2Q9H0W7 228 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 USP29Q9HBJ7 922 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 KANSL3Q9P2N6 904 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 BTBD19C9JJ37 291 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 MYCLP12524 364 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 GTF2H1P32780 548 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 RPA3P35244 121 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 COG2Q14746 738 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 OLFML1Q6UWY5 402 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 NSMFQ6X4W1 530 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 NLGN2Q8NFZ4 835 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 CLEC4DQ8WXI8 215 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 ABHD8Q96I13 439 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 TAAR1Q96RJ0 339 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 LXNQ9BS40 222 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 MTUS1Q9ULD2 1270 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms