RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 SLC8B1Q6J4K2 584 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.28
SPG7-204ENST00000561911 WHAMMQ8TF30 809 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 SHC3Q92529 594 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 TWNKQ96RR1 684 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 SYT15Q9BQS2 421 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 CLSTN3Q9BQT9 956 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 ACBD6Q9BR61 282 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 EMILIN2Q9BXX0 1053 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 HMGXB4Q9UGU5 601 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 CDY1Q9Y6F8 540 aa16.77■□□□□ 0.28
SPG7-204ENST00000561911 ADAM12O43184 909 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 TRIM21P19474 475 aaKnown RBP16.76■□□□□ 0.27
SPG7-204ENST00000561911 OR1D2P34982 312 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 NDUFV1P49821 464 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 FXR1P51114 621 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPG7-204ENST00000561911 TSPY1Q01534 308 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 RAPGEF1Q13905 1077 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 INTS6LQ5JSJ4 861 aaKnown RBP16.76■□□□□ 0.27
SPG7-204ENST00000561911 SMYD5Q6GMV2 418 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 VSTM4Q8IW00 320 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 MRFAP1L1Q96HT8 127 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 KLHL5Q96PQ7 755 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 TMEM209Q96SK2 561 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 NT5C1AQ9BXI3 368 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 STK33Q9BYT3 514 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 ELOVL4Q9GZR5 314 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 ZCWPW1Q9H0M4 648 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 LMCD1Q9NZU5 365 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 CEP72Q9P209 647 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 CDH9Q9ULB4 789 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 PLXNA4Q9HCM2 1894 aa16.76■□□□□ 0.27
SPG7-204ENST00000561911 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 ADH1AP07327 375 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 OR4Q2P0C623 313 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 KRT5P13647 590 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 CPB1P15086 417 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 ARPP19P56211 112 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 PSMC1P62191 440 aaKnown RBP16.75■□□□□ 0.27
SPG7-204ENST00000561911 ROR1Q01973 937 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 ORC1Q13415 861 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 RAB33AQ14088 237 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 ADGRE1Q14246 886 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 DRAP1Q14919 205 aaPredicted RBP16.75■□□□□ 0.27
SPG7-204ENST00000561911 FIGNQ5HY92 759 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 Q7L0L9 218 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 GLYCTKQ8IVS8 523 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 DCP1BQ8IZD4 617 aaKnown RBP16.75■□□□□ 0.27
SPG7-204ENST00000561911 RBBP8NLQ8NC74 664 aaPredicted RBP16.75■□□□□ 0.27
SPG7-204ENST00000561911 TNIP3Q96KP6 325 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 NUP58Q9BVL2 599 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 TTYH3Q9C0H2 523 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 DNAI2Q9GZS0 605 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 DPEP3Q9H4B8 488 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 NLRC4Q9NPP4 1024 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 CRTAC1Q9NQ79 661 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 CNTN6Q9UQ52 1028 aa16.75■□□□□ 0.27
SPG7-204ENST00000561911 ATP2C2O75185 946 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 PTPN1P18031 435 aaKnown RBP16.74■□□□□ 0.27
SPG7-204ENST00000561911 POU3F3P20264 500 aaPredicted RBP16.74■□□□□ 0.27
SPG7-204ENST00000561911 ZNF132P52740 706 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 RAD23BP54727 409 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 CCDC142Q17RM4 750 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 ZNF394Q53GI3 561 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 SPECC1LQ69YQ0 1117 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 CACNA2D4Q7Z3S7 1137 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 ACOT1Q86TX2 421 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 LRRTM3Q86VH5 581 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 CRYBG2Q8N1P7 616 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 SLC4A11Q8NBS3 891 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 B3GALNT2Q8NCR0 500 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 PPP2R3CQ969Q6 453 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 IQCDQ96DY2 449 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 SPAG5Q96R06 1193 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 GAS2L1Q99501 681 aaPredicted RBP16.74■□□□□ 0.27
SPG7-204ENST00000561911 PKMYT1Q99640 499 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 EDEM3Q9BZQ6 932 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 NSUN3Q9H649 340 aaKnown RBP16.74■□□□□ 0.27
SPG7-204ENST00000561911 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 TSC2P49815 1807 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 COL4A4P53420 1690 aaPredicted RBP16.74■□□□□ 0.27
SPG7-204ENST00000561911 VWA8A3KMH1 1905 aa16.74■□□□□ 0.27
SPG7-204ENST00000561911 WDR27A2RRH5 827 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 MYBPHLA2RUH7 354 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 F8VZ95 297 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 FOXN3O00409 490 aaPredicted RBP16.73■□□□□ 0.27
SPG7-204ENST00000561911 CLASP2O75122 1294 aaKnown RBP16.73■□□□□ 0.27
SPG7-204ENST00000561911 PNMA6AP0CW24 399 aaPredicted RBP16.73■□□□□ 0.27
SPG7-204ENST00000561911 KLRC2P26717 231 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 USP8P40818 1118 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 JAM2P57087 298 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 GPR17Q13304 367 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 SLC39A12Q504Y0 691 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 MDH1BQ5I0G3 518 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 FAM171BQ6P995 826 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms