RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 FOXK2Q01167 660 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 GAS6Q14393 721 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 MGAT5BQ3V5L5 792 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 WDR44Q5JSH3 913 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 GPR158Q5T848 1215 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 RRAGBQ5VZM2 374 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 YAF2Q8IY57 180 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 FAM200AQ8TCP9 573 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 TMC2Q8TDI7 906 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 GIPC2Q8TF65 315 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 SAAL1Q96ER3 474 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 FGFBP2Q9BYJ0 223 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 PANK2Q9BZ23 570 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 MRPL44Q9H9J2 332 aaKnown RBP12.57□□□□□ -0.4
USP3-220ENST00000561381 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 RBM12Q9NTZ6 932 aaKnown RBP12.57□□□□□ -0.4
USP3-220ENST00000561381 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 DSEQ9UL01 958 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 ASB3Q9Y575 518 aa12.57□□□□□ -0.4
USP3-220ENST00000561381 SRPRBQ9Y5M8 271 aaKnown RBP12.57□□□□□ -0.4
USP3-220ENST00000561381 DMXL1Q9Y485 3027 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 ZNF292O60281 2723 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 CHADO15335 359 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 SYT1P21579 422 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 PAX3P23760 479 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 FCHO2Q0JRZ9 810 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 TXNDC11Q6PKC3 985 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 ERMP1Q7Z2K6 904 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 METTL23Q86XA0 190 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 STKLD1Q8NE28 680 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 FAM213AQ9BRX8 229 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 SMG9Q9H0W8 520 aaKnown RBP12.56□□□□□ -0.4
USP3-220ENST00000561381 TMLHEQ9NVH6 421 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 ABI2Q9NYB9 513 aaPredicted RBP12.56□□□□□ -0.4
USP3-220ENST00000561381 GTSE1Q9NYZ3 720 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 HSFX1Q9UBD0 423 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 CCDC39Q9UFE4 941 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 SMG5Q9UPR3 1016 aaKnown RBP12.56□□□□□ -0.4
USP3-220ENST00000561381 TCHHQ07283 1943 aa12.56□□□□□ -0.4
USP3-220ENST00000561381 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 CEP250Q9BV73 2442 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 GOLGA8IPA6NC78 632 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 GOLGA8JA6NMD2 632 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 KPNA7A9QM74 516 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 GCNT3O95395 438 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 HAPLN1P10915 354 aaPredicted RBP12.55□□□□□ -0.4
USP3-220ENST00000561381 IDEP14735 1019 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 PDCP20941 246 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 POLR2BP30876 1174 aaKnown RBP12.55□□□□□ -0.4
USP3-220ENST00000561381 HOXC13P31276 330 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 TUFMP49411 452 aaKnown RBP12.55□□□□□ -0.4
USP3-220ENST00000561381 GPR15P49685 360 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 KPNA1P52294 538 aaPredicted RBP12.55□□□□□ -0.4
USP3-220ENST00000561381 TFAMQ00059 246 aaKnown RBP12.55□□□□□ -0.4
USP3-220ENST00000561381 SATB1Q01826 763 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 TNK2Q07912 1038 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 POSTNQ15063 836 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 L1TD1Q5T7N2 865 aaKnown RBP12.55□□□□□ -0.4
USP3-220ENST00000561381 Q6ZS52 159 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 SV2BQ7L1I2 683 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 ITIH5Q86UX2 942 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 EPC1Q9H2F5 836 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 TASP1Q9H6P5 420 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 SEL1LQ9UBV2 794 aa12.55□□□□□ -0.4
USP3-220ENST00000561381 FRYLO94915 3013 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 MED19A0JLT2 244 aaPredicted RBP12.54□□□□□ -0.4
USP3-220ENST00000561381 SPECC1L-ADORA2AF8WAN1 911 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 DPYSL4O14531 572 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 IL18RAPO95256 599 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 FGF19O95750 216 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 GAP43P17677 238 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 CTHP32929 405 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 TXLNAP40222 546 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 POU5F1Q01860 360 aaKnown RBP12.54□□□□□ -0.4
USP3-220ENST00000561381 DMWDQ09019 674 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 VEPH1Q14D04 833 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 LPAL2Q16609 132 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 CCDC142Q17RM4 750 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 SV2CQ496J9 727 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 SDHAF4Q5VUM1 108 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 TMEM150AQ86TG1 271 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 BRSK2Q8IWQ3 736 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 CBWD1Q9BRT8 395 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 SLC46A2Q9BY10 475 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 PCIF1Q9H4Z3 704 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 C2orf42Q9NWW7 574 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 EXOC7Q9UPT5 735 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
USP3-220ENST00000561381 NUP210Q8TEM1 1887 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms