RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 TINAGL1Q9GZM7 467 aaPredicted RBP4.77□□□□□ -1.65
CASC4-211ENST00000561305 MRPL46Q9H2W6 279 aaKnown RBP4.77□□□□□ -1.65
CASC4-211ENST00000561305 RNF7Q9UBF6 113 aa4.77□□□□□ -1.65
CASC4-211ENST00000561305 DKK3Q9UBP4 350 aa4.77□□□□□ -1.65
CASC4-211ENST00000561305 LINC01548A6NM66 108 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 ITGALP20701 1170 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 CCND1P24385 295 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 RECQLP46063 649 aaPredicted RBP4.76□□□□□ -1.65
CASC4-211ENST00000561305 CCT8P50990 548 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 EXOSC10Q01780 885 aaKnown RBP4.76□□□□□ -1.65
CASC4-211ENST00000561305 PLAC9Q5JTB6 97 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 ZNF551Q7Z340 670 aaPredicted RBP4.76□□□□□ -1.65
CASC4-211ENST00000561305 HEATR3Q7Z4Q2 680 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 USP37Q86T82 979 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 CAMKK1Q8N5S9 505 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 SCARB1Q8WTV0 552 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 DDB2Q92466 427 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 RGMAQ96B86 450 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 NELL2Q99435 816 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 SLC29A3Q9BZD2 475 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 SLAMF7Q9NQ25 335 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 PADI4Q9UM07 663 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 RAD54BQ9Y620 910 aa4.76□□□□□ -1.65
CASC4-211ENST00000561305 VPS4BO75351 444 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 LATS1O95835 1130 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 POU2F2P09086 479 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 TYRP14679 529 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 JUPP14923 745 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 CD6P30203 668 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 PHKA1P46020 1223 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 GCLCP48506 637 aaPredicted RBP4.75□□□□□ -1.65
CASC4-211ENST00000561305 ZNF81P51508 661 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 SSBP2P81877 361 aaPredicted RBP4.75□□□□□ -1.65
CASC4-211ENST00000561305 SLC10A2Q12908 348 aaPredicted RBP4.75□□□□□ -1.65
CASC4-211ENST00000561305 BOP1Q14137 746 aaKnown RBP4.75□□□□□ -1.65
CASC4-211ENST00000561305 LLGL1Q15334 1064 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 TBCCQ15814 346 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 TMEM240Q5SV17 173 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 SUMO4Q6EEV6 95 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 USP45Q70EL2 814 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 KLHDC4Q8TBB5 520 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 FAM167AQ96KS9 214 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 ZNF778Q96MU6 729 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 SERHLQ9NQF3 203 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 ARHGEF3Q9NR81 526 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 ZNF70Q9UC06 446 aaPredicted RBP4.75□□□□□ -1.65
CASC4-211ENST00000561305 ABCF2Q9UG63 623 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 SERGEFQ9UGK8 458 aa4.75□□□□□ -1.65
CASC4-211ENST00000561305 FEZ2Q9UHY8 353 aaPredicted RBP4.75□□□□□ -1.65
CASC4-211ENST00000561305 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 TARM1B6A8C7 271 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 DTNBO60941 627 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 HNRNPCP07910 306 aaKnown RBP eCLIP4.74□□□□□ -1.65
CASC4-211ENST00000561305 CHRM3P20309 590 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 MAP2K6P52564 334 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 VPS53Q5VIR6 699 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 FAM160B1Q5W0V3 765 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 ZNF425Q6IV72 752 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 DTX2Q86UW9 622 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 PPP1R3BQ86XI6 285 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 ATRIPQ8WXE1 791 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 TNPO1Q92973 898 aaKnown RBP4.74□□□□□ -1.65
CASC4-211ENST00000561305 WDR26Q9H7D7 661 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.74□□□□□ -1.65
CASC4-211ENST00000561305 LMBRD1Q9NUN5 540 aa4.74□□□□□ -1.65
CASC4-211ENST00000561305 WDR91A4D1P6 747 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 M0QYG6 137 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 IGSF3O75054 1194 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 NXPH3O95157 252 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 FTLP02792 175 aaPredicted RBP4.73□□□□□ -1.65
CASC4-211ENST00000561305 GNAI2P04899 355 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 FAM163BP0C2L3 166 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 EBLN1P0CF75 366 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 ZNF618Q5T7W0 954 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 TEDDM1Q5T9Z0 273 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 CEP85Q6P2H3 762 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 ZNF782Q6ZMW2 699 aaPredicted RBP4.73□□□□□ -1.65
CASC4-211ENST00000561305 CPA6Q8N4T0 437 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 REPS1Q96D71 796 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 SMAD5Q99717 465 aaKnown RBP4.73□□□□□ -1.65
CASC4-211ENST00000561305 PNPOQ9NVS9 261 aa4.73□□□□□ -1.65
CASC4-211ENST00000561305 ZNF804BA4D1E1 1349 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 ZNF213O14771 459 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 PPM1DO15297 605 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 SNUPNO95149 360 aaKnown RBP4.72□□□□□ -1.65
CASC4-211ENST00000561305 AHSGP02765 367 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 NDUFB7P17568 137 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 ZNF134P52741 427 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
CASC4-211ENST00000561305 GRM1Q13255 1194 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 EZH2Q15910 746 aaKnown RBP4.72□□□□□ -1.65
CASC4-211ENST00000561305 SRSF7Q16629 238 aaKnown RBP eCLIP4.72□□□□□ -1.65
CASC4-211ENST00000561305 PROSER3Q2NL68 480 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 AARS2Q5JTZ9 985 aaKnown RBP4.72□□□□□ -1.65
CASC4-211ENST00000561305 EPHA10Q5JZY3 1008 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 EMC10Q5UCC4 262 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 SFRP4Q6FHJ7 346 aaPredicted RBP4.72□□□□□ -1.65
CASC4-211ENST00000561305 ANKRD16Q6P6B7 361 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 TMEM108Q6UXF1 575 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 VGLL2Q8N8G2 317 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms