RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 TRIP6Q15654 476 aaKnown RBP4.43□□□□□ -1.7
USP8-216ENST00000561206 ZNF628Q5EBL2 1059 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 FAM9AQ8IZU1 332 aaPredicted RBP4.43□□□□□ -1.7
USP8-216ENST00000561206 RFKQ969G6 155 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 VCPIP1Q96JH7 1222 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 TRIB1Q96RU8 372 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 ALG8Q9BVK2 526 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.43□□□□□ -1.7
USP8-216ENST00000561206 IPPQ9Y573 584 aa4.43□□□□□ -1.7
USP8-216ENST00000561206 A0A0B4J269 797 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 TLDC2A0PJX2 215 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 PRSS44E7EML9 344 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 ADAMTS3O15072 1205 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 PCSK6P29122 969 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 CNGA1P29973 690 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 SLC16A1P53985 500 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 NANOS2P60321 138 aaKnown RBP4.42□□□□□ -1.7
USP8-216ENST00000561206 TUBB3Q13509 450 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 CLUL1Q15846 466 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 FNDC1Q4ZHG4 1894 aaPredicted RBP4.42□□□□□ -1.7
USP8-216ENST00000561206 CAMKK1Q8N5S9 505 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 AOPEPQ8N6M6 819 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 SLC17A8Q8NDX2 589 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 POC1BQ8TC44 478 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 PIGOQ8TEQ8 1089 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 LYZL4Q96KX0 146 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 SH2D3AQ9BRG2 576 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 MDFICQ9P1T7 246 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 CALCOCO1Q9P1Z2 691 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.42□□□□□ -1.7
USP8-216ENST00000561206 SPATA31A3Q5VYP0 1347 aa4.42□□□□□ -1.7
USP8-216ENST00000561206 OAZ2O95190 189 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 HNRNPCP07910 306 aaKnown RBP eCLIP4.41□□□□□ -1.7
USP8-216ENST00000561206 C5AR1P21730 350 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 NDUFV1P49821 464 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 CCT8P50990 548 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 HTRA4P83105 476 aaPredicted RBP4.41□□□□□ -1.7
USP8-216ENST00000561206 DAZAP2Q15038 168 aaPredicted RBP4.41□□□□□ -1.7
USP8-216ENST00000561206 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 C3orf36Q3SXR2 165 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 GADL1Q6ZQY3 521 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 IRF2BP2Q7Z5L9 587 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 PDSS2Q86YH6 399 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 GALNT16Q8N428 558 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 FBXO41Q8TF61 875 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 JADE3Q92613 823 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 SCAMP4Q969E2 229 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 FKBP10Q96AY3 582 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 REPS1Q96D71 796 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 OSBPL9Q96SU4 736 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 SMOQ99835 787 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 FAM126AQ9BYI3 521 aaPredicted RBP4.41□□□□□ -1.7
USP8-216ENST00000561206 LIMCH1Q9UPQ0 1083 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 NR2E3Q9Y5X4 410 aa4.41□□□□□ -1.7
USP8-216ENST00000561206 EME2A4GXA9 379 aaPredicted RBP4.4□□□□□ -1.71
USP8-216ENST00000561206 HTRA2O43464 458 aaPredicted RBP4.4□□□□□ -1.71
USP8-216ENST00000561206 EBLN1P0CF75 366 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 NR2F6P10588 404 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 CYP2D6P10635 497 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 LPOP22079 712 aaPredicted RBP4.4□□□□□ -1.71
USP8-216ENST00000561206 EDNRBP24530 442 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 IL10RAQ13651 578 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 SDE2Q6IQ49 451 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 CBARPQ8N350 705 aaPredicted RBP4.4□□□□□ -1.71
USP8-216ENST00000561206 CNTD1Q8N815 330 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 ATL2Q8NHH9 583 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 CTAGE1Q96RT6 745 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 DMRTA2Q96SC8 542 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 TPSD1Q9BZJ3 242 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 ETAA1Q9NY74 926 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 EHD3Q9NZN3 535 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 TMA7Q9Y2S6 64 aaKnown RBP4.4□□□□□ -1.71
USP8-216ENST00000561206 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.4□□□□□ -1.71
USP8-216ENST00000561206 PHLDB1Q86UU1 1377 aa4.4□□□□□ -1.71
USP8-216ENST00000561206 TTC3P53804 2025 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 POLRMTO00411 1230 aaKnown RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 TRIAP1O43715 76 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 JTBO76095 146 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 NHLRC4P0CG21 123 aaPredicted RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 ZFXP17010 805 aaPredicted RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 IARSP41252 1262 aaKnown RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 FHL3Q13643 280 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 CCDC93Q567U6 631 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 PLAC9Q5JTB6 97 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 MRPL10Q7Z7H8 261 aaKnown RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 ACRBPQ8NEB7 543 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 C1orf162Q8NEQ5 155 aaPredicted RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 NSUN6Q8TEA1 469 aaKnown RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 CLPTM1LQ96KA5 538 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 SERTAD4Q9NUC0 356 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 RLIMQ9NVW2 624 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 MKS1Q9NXB0 559 aa4.39□□□□□ -1.71
USP8-216ENST00000561206 SIDT1Q9NXL6 827 aaKnown RBP4.39□□□□□ -1.71
USP8-216ENST00000561206 CCDC154A6NI56 674 aa4.38□□□□□ -1.71
USP8-216ENST00000561206 FAM90A8PA6NJQ4 464 aa4.38□□□□□ -1.71
USP8-216ENST00000561206 KCNU1A8MYU2 1149 aa4.38□□□□□ -1.71
USP8-216ENST00000561206 NT5C1B-RDH14C9J2C7 533 aa4.38□□□□□ -1.71
USP8-216ENST00000561206 PRRT4C9JH25 899 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms