RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 AFF4Q9UHB7 1163 aaKnown RBP10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 CDH9Q9ULB4 789 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 XIRP2A4UGR9 3374 aa10.31□□□□□ -0.76
RABGGTA-221ENST00000561055 C5orf42Q9H799 3197 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 KCNJ18B7U540 433 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 ZMYND10O75800 440 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 VNN2O95498 520 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 HNRNPA1P09651 372 aaKnown RBP eCLIP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 ZNF18P17022 549 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 LMO2P25791 158 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 GNL1P36915 607 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 ASPAP45381 313 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 MTIF2P46199 727 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 ZNF165P49910 485 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 ITIH3Q06033 890 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 INCA1Q0VD86 236 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 KCNJ12Q14500 433 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 IQCB1Q15051 598 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 PUS10Q3MIT2 529 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 INTS6LQ5JSJ4 861 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 SPOPLQ6IQ16 392 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 RNF19BQ6ZMZ0 732 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 LRRTM3Q86VH5 581 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 OSTM1Q86WC4 334 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 GLYCTKQ8IVS8 523 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 DCP1BQ8IZD4 617 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 CRYBG2Q8N1P7 616 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 TTC39CQ8N584 583 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 CCDC150Q8NCX0 1101 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 SPPL2BQ8TCT7 592 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 TMEM209Q96SK2 561 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 PI4K2AQ9BTU6 479 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 SDCBP2Q9H190 292 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 MMRN2Q9H8L6 949 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 SFXN1Q9H9B4 322 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 MAN1C1Q9NR34 630 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 THEGQ9P2T0 379 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 MAGEC2Q9UBF1 373 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 NXF1Q9UBU9 619 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 LIMA1Q9UHB6 759 aaKnown RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 CD207Q9UJ71 328 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 BARX2Q9UMQ3 279 aaPredicted RBP10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 NME7Q9Y5B8 376 aa10.3□□□□□ -0.76
RABGGTA-221ENST00000561055 MTMR11A4FU01 709 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 CPB1P15086 417 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 CDH8P55286 799 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 TSPY1Q01534 308 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 SMAD4Q13485 552 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 MAPRE1Q15691 268 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 NFE2Q16621 373 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 AAK1Q2M2I8 961 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 VWA3BQ502W6 1294 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 WDR44Q5JSH3 913 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 LLGL2Q6P1M3 1020 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 CCDC149Q6ZUS6 474 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 APTXQ7Z2E3 356 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 DHX40Q8IX18 779 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 SUSD6Q92537 303 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 TATDN2Q93075 761 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 JAKMIP2Q96AA8 810 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 MRPL45Q9BRJ2 306 aaKnown RBP10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 PRKD2Q9BZL6 878 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 ADAM7Q9H2U9 754 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 SNX25Q9H3E2 840 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 NDST4Q9H3R1 872 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 ABCB6Q9NP58 842 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 PRDM6Q9NQX0 595 aa10.29□□□□□ -0.76
RABGGTA-221ENST00000561055 NUP210Q8TEM1 1887 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 GRXCR2A6NFK2 248 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 MBTPS2O43462 519 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 SEC24AO95486 1093 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 C8AP07357 584 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 OR4Q2P0C623 313 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 SPATA31D3P0C874 917 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 KCNA5P22460 613 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 TBXAS1P24557 533 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 ELF1P32519 619 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 MRPS5P82675 430 aaKnown RBP10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 GCNT1Q02742 428 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 ADCY1Q08828 1119 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 KRT31Q15323 416 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 SLC39A12Q504Y0 691 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 GBP6Q6ZN66 633 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 SPATA31D4Q6ZUB0 917 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 GPR149Q86SP6 731 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 AOPEPQ8N6M6 819 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 UBR7Q8N806 425 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 OR6B3Q8NGW1 331 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 ZNF707Q96C28 371 aaPredicted RBP10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 TNIP3Q96KP6 325 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 FAM81BQ96LP2 452 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 CEP295NLQ96MC4 621 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 SYT15Q9BQS2 421 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms