RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 INPPL1O15357 1258 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 DDX3YO15523 660 aaKnown RBP18.16■□□□□ 0.5
HDDC3-206ENST00000561036 MICAL2O94851 1124 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 CCL5P13501 91 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 SELPP16109 830 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 CTNNA2P26232 953 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 MLH1P40692 756 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 GSCP56915 257 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-206ENST00000561036 LILRA4P59901 499 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 MAMLD1Q13495 774 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 CRYBG2Q8N1P7 616 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 RASGEF1CQ8N431 466 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 APPL2Q8NEU8 664 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 SPATA4Q8NEY3 305 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 DDX27Q96GQ7 796 aaKnown RBP18.16■□□□□ 0.5
HDDC3-206ENST00000561036 PSMB7Q99436 277 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 MRPL45Q9BRJ2 306 aaKnown RBP18.16■□□□□ 0.5
HDDC3-206ENST00000561036 FTHL17Q9BXU8 183 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 MIS12Q9H081 205 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 TSPYL2Q9H2G4 693 aaPredicted RBP18.16■□□□□ 0.5
HDDC3-206ENST00000561036 RSAD1Q9HA92 442 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 RGS18Q9NS28 235 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 WDR35Q9P2L0 1181 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 ANAPC7Q9UJX3 599 aa18.16■□□□□ 0.5
HDDC3-206ENST00000561036 SCN1AP35498 2009 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 CCDC66A2RUB6 948 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 SPTLC1O15269 473 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 HUS1O60921 280 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 EOMESO95936 686 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 COMTP21964 271 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 WARSP23381 471 aaKnown RBP18.15■□□□□ 0.5
HDDC3-206ENST00000561036 SSTR3P32745 418 aaPredicted RBP18.15■□□□□ 0.5
HDDC3-206ENST00000561036 MAN1A1P33908 653 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 ARHGAP17Q68EM7 881 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 CCDC70Q6NSX1 233 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 ZNF598Q86UK7 904 aaKnown RBP18.15■□□□□ 0.5
HDDC3-206ENST00000561036 ECHDC2Q86YB7 292 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 FAM126BQ8IXS8 530 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 FEZF2Q8TBJ5 459 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 CD101Q93033 1021 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 DEFB118Q96PH6 123 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 SNX25Q9H3E2 840 aa18.15■□□□□ 0.5
HDDC3-206ENST00000561036 TCRBV5S1A1TA0A578 114 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 MEIS3P2A8K0S8 358 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 TMEM110-MUSTN1A8MSY1 372 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 PGRMC1O00264 195 aaKnown RBP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 PITPNM1O00562 1244 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 SPOPO43791 374 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 PROSCO94903 275 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 HSPA6P17066 643 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 CTNNA1P35221 906 aaKnown RBP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 GNL1P36915 607 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 FAM189BP81408 668 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 GRIK3Q13003 919 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 DNAJC24Q6P3W2 148 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 SLC24A5Q71RS6 500 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 LRRC8DQ7L1W4 858 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 NOA1Q8NC60 698 aaKnown RBP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 C3orf20Q8ND61 904 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 OR6B3Q8NGW1 331 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 LPPQ93052 612 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 MS4A14Q96JA4 679 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 UROC1Q96N76 676 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 NAP1L3Q99457 506 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 RNF208Q9H0X6 261 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 RNF19AQ9NV58 838 aa18.14■□□□□ 0.49
HDDC3-206ENST00000561036 CHORDC1Q9UHD1 332 aaPredicted RBP18.14■□□□□ 0.49
HDDC3-206ENST00000561036 FAM170AA1A519 330 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 TARSL2A2RTX5 802 aaKnown RBP18.13■□□□□ 0.49
HDDC3-206ENST00000561036 TMEM191CA6NGB0 347 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 A8MXQ7 604 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 M0QYV0 167 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 CEP104O60308 925 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 COL6A1P12109 1028 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 GPD2P43304 727 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 GABRB2P47870 512 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 DNA2P51530 1060 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 SNX16P57768 344 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 ORC1Q13415 861 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 ZNF268Q14587 947 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-206ENST00000561036 MBTPS1Q14703 1052 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 MTFR1Q15390 333 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 TMEM86AQ8N2M4 240 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-206ENST00000561036 SPATA18Q8TC71 538 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 KBTBD7Q8WVZ9 684 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 RUBCNQ92622 972 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 C18orf8Q96DM3 657 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 TNIP3Q96KP6 325 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 GOLGA2P5Q9HBQ8 144 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 ARGLU1Q9NWB6 273 aaPredicted RBP18.13■□□□□ 0.49
HDDC3-206ENST00000561036 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 IP6K2Q9UHH9 426 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 L1RE1Q9UN81 338 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 PCDHA3Q9Y5H8 950 aa18.13■□□□□ 0.49
HDDC3-206ENST00000561036 SIGLEC16A6NMB1 481 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 C9IYK1 514 aa18.12■□□□□ 0.49
HDDC3-206ENST00000561036 PODXLO00592 558 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms