RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 PHLDB3Q6NSJ2 640 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 PDXDC1Q6P996 788 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 TSSK4Q6SA08 328 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 MTSS1LQ765P7 747 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 APBB1IPQ7Z5R6 666 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-211ENST00000561010 GPBP1Q86WP2 473 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 ANKMY2Q8IV38 441 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 C1orf210Q8IVY1 113 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 KIAA2013Q8IYS2 634 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 SYT2Q8N9I0 419 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-211ENST00000561010 KDF1Q8NAX2 398 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-211ENST00000561010 ZNF461Q8TAF7 563 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 BICD1Q96G01 975 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 SUSD3Q96L08 255 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 TMEM209Q96SK2 561 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 REEP2Q9BRK0 252 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 CRISPLD1Q9H336 500 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 ETNK1Q9HBU6 452 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 TOPORSQ9NS56 1045 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-211ENST00000561010 SLC38A7Q9NVC3 462 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 SPATA6Q9NWH7 488 aaPredicted RBP7.88□□□□□ -1.15
GABPB1-211ENST00000561010 CEP72Q9P209 647 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 NDRG2Q9UN36 371 aaKnown RBP7.88□□□□□ -1.15
GABPB1-211ENST00000561010 GON4LQ3T8J9 2241 aa7.88□□□□□ -1.15
GABPB1-211ENST00000561010 NCOR2Q9Y618 2525 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 KANSL1LA0AUZ9 987 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ARHGEF37A1IGU5 675 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 LACTBL1A8MY62 500 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 H3BQV1 296 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 LAD1O00515 517 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 TRAPPC3O43617 180 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 MOSPD3O75425 235 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 CPB1P15086 417 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 PTPN2P17706 415 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 PLCG1P19174 1290 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 NMT1P30419 496 aaKnown RBP7.87□□□□□ -1.15
GABPB1-211ENST00000561010 HOXC13P31276 330 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ELF1P32519 619 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 VIPR2P41587 438 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 DPYDQ12882 1025 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 CLN3Q13286 438 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 MRPL58Q14197 206 aaKnown RBP7.87□□□□□ -1.15
GABPB1-211ENST00000561010 KARSQ15046 597 aaKnown RBP7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ENOX2Q16206 610 aaKnown RBP7.87□□□□□ -1.15
GABPB1-211ENST00000561010 UVSSAQ2YD98 709 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 STXBP5Q5T5C0 1151 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ERICH6BQ5W0A0 696 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 SLC39A4Q6P5W5 647 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 VITQ6UXI7 678 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 USP49Q70CQ1 688 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 HAUS6Q7Z4H7 955 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 STKLD1Q8NE28 680 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 FAM200AQ8TCP9 573 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 RSPRY1Q96DX4 576 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 CDK5RAP3Q96JB5 506 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 FAM84AQ96KN4 292 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 HINFPQ9BQA5 517 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 DDX23Q9BUQ8 820 aaKnown RBP7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ZHX3Q9H4I2 956 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 LTB4R2Q9NPC1 389 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 BLOC1S4Q9NUP1 217 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ZNF358Q9NW07 568 aa7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ZFP37Q9Y6Q3 630 aaPredicted RBP7.87□□□□□ -1.15
GABPB1-211ENST00000561010 ADAMTS9Q9P2N4 1935 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 TTC26A0AVF1 554 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 TMEM229AB2RXF0 380 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ANKRD63C9JTQ0 380 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 H7C4K7 107 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 K7ENM7 598 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 SYN3O14994 580 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 CLDN3O15551 220 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 SPINT1O43278 529 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 FAM189A1O60320 539 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 TOM1L1O75674 476 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 STAU1O95793 577 aaKnown RBP7.86□□□□□ -1.15
GABPB1-211ENST00000561010 LMNAP02545 664 aaKnown RBP7.86□□□□□ -1.15
GABPB1-211ENST00000561010 NFICP08651 508 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 POU2F2P09086 479 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ATF2P15336 505 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ACOT2P49753 483 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 LIG4P49917 911 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 NCKAP1LP55160 1127 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 SEC13P55735 322 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 CSTF1Q05048 431 aaKnown RBP7.86□□□□□ -1.15
GABPB1-211ENST00000561010 MCL1Q07820 350 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 FZD5Q13467 585 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 RABEP1Q15276 862 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 TEAD2Q15562 447 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ZBTB6Q15916 424 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ZC2HC1CQ53FD0 456 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-211ENST00000561010 RILPL1Q5EBL4 403 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 SCARA3Q6AZY7 606 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 JADE1Q6IE81 842 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ZNF280DQ6N043 979 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 PDZD4Q76G19 769 aaPredicted RBP7.86□□□□□ -1.15
GABPB1-211ENST00000561010 TCEAL8Q8IYN2 117 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 MYCT1Q8N699 235 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
GABPB1-211ENST00000561010 ZSWIM2Q8NEG5 633 aa7.86□□□□□ -1.15
GABPB1-211ENST00000561010 TTC8Q8TAM2 541 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms