RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 EFEMP2O95967 443 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 WNT11O96014 354 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 FGBP02675 491 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 FAM163BP0C2L3 166 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TRIM49P0CI25 452 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TRIM49CP0CI26 452 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CDK11BP21127 795 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PAX3P23760 479 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 AKAP5P24588 427 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CDC25BP30305 580 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 RPL9P32969 192 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 MTIF2P46199 727 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 AARSP49588 968 aaKnown RBP eCLIP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 ZNF75DP51815 510 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 AFF1P51825 1210 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 YARSP54577 528 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 UBASH3AP57075 661 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 WDR5P61964 334 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 RAC1P63000 192 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 HTRA4P83105 476 aaPredicted RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 FPGSQ05932 587 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TBX2Q13207 712 aaPredicted RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TMEM132AQ24JP5 1023 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CCDC40Q4G0X9 1142 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CBWD6Q4V339 395 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CBWD3Q5JTY5 395 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CBWD5Q5RIA9 395 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TDRD10Q5VZ19 366 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 KRT39Q6A163 491 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 JADE1Q6IE81 842 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PSRC1Q6PGN9 363 aaPredicted RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CD300LGQ6UXG3 332 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 ZNF365Q70YC5 407 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TRAPPC11Q7Z392 1133 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 DEFB128Q7Z7B8 93 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 C7orf61Q8IZ16 206 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 C1orf127Q8N9H9 656 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PHOSPHO2Q8TCD6 241 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CACTINQ8WUQ7 758 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 SEMA4DQ92854 862 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PDLIM2Q96JY6 352 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 CASD1Q96PB1 797 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 GAD1Q99259 594 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 POP1Q99575 1024 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 GDF15Q99988 308 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TRIM6Q9C030 488 aaPredicted RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 XPO4Q9C0E2 1151 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TTYH3Q9C0H2 523 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 VPS16Q9H269 839 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PRO3102Q9H379 93 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 FAM124BQ9H5Z6 455 aaPredicted RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 RSAD1Q9HA92 442 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PRM3Q9NNZ6 103 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 SIX2Q9NPC8 291 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 SLC38A7Q9NVC3 462 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 TAB2Q9NYJ8 693 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 IFNKQ9P0W0 207 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 KANSL3Q9P2N6 904 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PRKAG2Q9UGJ0 569 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 UBQLN1Q9UMX0 589 aaKnown RBP5.9□□□□□ -1.46
ZEB1-220ENST00000560909 PLAGL2Q9UPG8 496 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 NR2E3Q9Y5X4 410 aa5.9□□□□□ -1.46
ZEB1-220ENST00000560909 ITIH6Q6UXX5 1313 aa5.9□□□□□ -1.47
ZEB1-220ENST00000560909 TANC1Q9C0D5 1861 aa5.9□□□□□ -1.47
ZEB1-220ENST00000560909 CHD9Q3L8U1 2897 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 TMEM189-UBE2V1I3L0A0 370 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 CBFA2T2O43439 604 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 ASS1P00966 412 aaKnown RBP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 SERPINC1P01008 464 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 CST3P01034 146 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 THP07101 528 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 NFICP08651 508 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 LINC00271P0C7V0 271 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 DLATP10515 647 aaKnown RBP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 HARSP12081 509 aaKnown RBP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 ACTN1P12814 892 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 PON1P27169 355 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 ATICP31939 592 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 BMP8BP34820 402 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 MATR3P43243 847 aaKnown RBP eCLIP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 GCLMP48507 274 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 MXI1P50539 228 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 OSTNP61366 133 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 TNP2Q05952 138 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 SOX4Q06945 474 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 GRIK3Q13003 919 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 TMEM132DQ14C87 1099 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 FILIP1LQ4L180 1135 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 HSP90AA4PQ58FG1 418 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 NOMO2Q5JPE7 1267 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 SCARA3Q6AZY7 606 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 GLB1LQ6UWU2 654 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 GBP6Q6ZN66 633 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.89□□□□□ -1.47
ZEB1-220ENST00000560909 VSTM4Q8IW00 320 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 COLGALT2Q8IYK4 626 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 LRRC52Q8N7C0 313 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 FBXL13Q8NEE6 735 aa5.89□□□□□ -1.47
ZEB1-220ENST00000560909 TAS1R2Q8TE23 839 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms