RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 M0QZQ0 153 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 MOCS3O95396 460 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 EN2P19622 333 aaPredicted RBP12.01□□□□□ -0.49
SNX1-212ENST00000560861 GATMP50440 423 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 CNGA2Q16280 664 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 TIGD5Q53EQ6 642 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 ARHGAP17Q68EM7 881 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 DENND1BQ6P3S1 775 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 DCLRE1AQ6PJP8 1040 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 DEFB128Q7Z7B8 93 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 SLFN11Q7Z7L1 901 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 NPAS4Q8IUM7 802 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 ADGRF2Q8IZF7 708 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 MCOLN2Q8IZK6 566 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 LRRC57Q8N9N7 239 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 SPATA18Q8TC71 538 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 RFFLQ8WZ73 363 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 LHX5Q9H2C1 402 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 AVENQ9NQS1 362 aaPredicted RBP12.01□□□□□ -0.49
SNX1-212ENST00000560861 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
SNX1-212ENST00000560861 KANSL3Q9P2N6 904 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 CYTH4Q9UIA0 394 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 GTF3C4Q9UKN8 822 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 COG5Q9UP83 839 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 STXBP5LQ9Y2K9 1186 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 PTPRDP23468 1912 aa12.01□□□□□ -0.49
SNX1-212ENST00000560861 NLRC5Q86WI3 1866 aa12□□□□□ -0.49
SNX1-212ENST00000560861 TCRBV5S1A1TA0A578 114 aa12□□□□□ -0.49
SNX1-212ENST00000560861 GRID2IPA4D2P6 1211 aa12□□□□□ -0.49
SNX1-212ENST00000560861 CYB561D2O14569 222 aa12□□□□□ -0.49
SNX1-212ENST00000560861 HUS1O60921 280 aa12□□□□□ -0.49
SNX1-212ENST00000560861 CYP11A1P05108 521 aa12□□□□□ -0.49
SNX1-212ENST00000560861 ITGB1P05556 798 aa12□□□□□ -0.49
SNX1-212ENST00000560861 PFKMP08237 780 aa12□□□□□ -0.49
SNX1-212ENST00000560861 CD19P15391 556 aa12□□□□□ -0.49
SNX1-212ENST00000560861 MMP8P22894 467 aa12□□□□□ -0.49
SNX1-212ENST00000560861 LMO2P25791 158 aa12□□□□□ -0.49
SNX1-212ENST00000560861 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
SNX1-212ENST00000560861 GPC5P78333 572 aa12□□□□□ -0.49
SNX1-212ENST00000560861 AMPD2Q01433 879 aa12□□□□□ -0.49
SNX1-212ENST00000560861 NAA35Q5VZE5 725 aa12□□□□□ -0.49
SNX1-212ENST00000560861 WSCD1Q658N2 575 aa12□□□□□ -0.49
SNX1-212ENST00000560861 MFSD5Q6N075 450 aa12□□□□□ -0.49
SNX1-212ENST00000560861 PPP1R2P3Q6NXS1 205 aa12□□□□□ -0.49
SNX1-212ENST00000560861 LCLAT1Q6UWP7 414 aa12□□□□□ -0.49
SNX1-212ENST00000560861 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
SNX1-212ENST00000560861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12□□□□□ -0.492e-8■■■■■ 31.5
SNX1-212ENST00000560861 PASD1Q8IV76 773 aa12□□□□□ -0.49
SNX1-212ENST00000560861 TMEM86AQ8N2M4 240 aa12□□□□□ -0.49
SNX1-212ENST00000560861 APPL2Q8NEU8 664 aa12□□□□□ -0.49
SNX1-212ENST00000560861 TPCN2Q8NHX9 752 aa12□□□□□ -0.49
SNX1-212ENST00000560861 KIF18AQ8NI77 898 aa12□□□□□ -0.49
SNX1-212ENST00000560861 URGCPQ8TCY9 931 aa12□□□□□ -0.49
SNX1-212ENST00000560861 CTNNBL1Q8WYA6 563 aaPredicted RBP12□□□□□ -0.49
SNX1-212ENST00000560861 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
SNX1-212ENST00000560861 RABGGTAQ92696 567 aa12□□□□□ -0.49
SNX1-212ENST00000560861 VCPIP1Q96JH7 1222 aa12□□□□□ -0.49
SNX1-212ENST00000560861 SUSD3Q96L08 255 aa12□□□□□ -0.49
SNX1-212ENST00000560861 NOX5Q96PH1 765 aa12□□□□□ -0.49
SNX1-212ENST00000560861 RTP3Q9BQQ7 232 aa12□□□□□ -0.49
SNX1-212ENST00000560861 ZNF518BQ9C0D4 1074 aa12□□□□□ -0.49
SNX1-212ENST00000560861 DPEP3Q9H4B8 488 aa12□□□□□ -0.49
SNX1-212ENST00000560861 L2HGDHQ9H9P8 463 aa12□□□□□ -0.49
SNX1-212ENST00000560861 RC3H2Q9HBD1 1191 aaKnown RBP12□□□□□ -0.49
SNX1-212ENST00000560861 F8W810 466 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 HOXA2O43364 376 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 MED7O43513 233 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 BUB1O43683 1085 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 MICAL2O94851 1124 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 KIF4AO95239 1232 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 ABCB4P21439 1286 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 IBSPP21815 317 aaPredicted RBP11.99□□□□□ -0.49
SNX1-212ENST00000560861 GNL1P36915 607 aaPredicted RBP11.99□□□□□ -0.49
SNX1-212ENST00000560861 GPD2P43304 727 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 BRCC3P46736 316 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 SGO2Q562F6 1265 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 KIAA0319Q5VV43 1072 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 ACOT1Q86TX2 421 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 TMEM35BQ8NCS4 154 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
SNX1-212ENST00000560861 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 OR6B3Q8NGW1 331 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 SLC35G2Q8TBE7 412 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 CPA5Q8WXQ8 436 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 LPIN3Q9BQK8 851 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 NRDE2Q9H7Z3 1164 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 ABCB6Q9NP58 842 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 OSGEPQ9NPF4 335 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 DNAJB4Q9UDY4 337 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
SNX1-212ENST00000560861 PCDHB7Q9Y5E2 793 aa11.99□□□□□ -0.49
SNX1-212ENST00000560861 PATJQ8NI35 1801 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 KIAA1671Q9BY89 1806 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 ABHD14A-ACY1A0A1B0GW23 586 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 FAM170AA1A519 330 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 A8MXQ7 604 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 B3GAT3O94766 335 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 SLC34A2O95436 690 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms