RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 IGKV2-30P06310 120 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CELA2AP08217 269 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CLEC2LP0C7M8 214 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CPA1P15085 419 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 ZKSCAN1P17029 563 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 PDCP20941 246 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 RPS6KB1P23443 525 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PSMA5P28066 241 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 ADCY1Q08828 1119 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 ANKRD1Q15327 319 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 EZH2Q15910 746 aaKnown RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 RABL6Q3YEC7 729 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 AMOTQ4VCS5 1084 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 TMEM177Q53S58 311 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 UTP14CQ5TAP6 766 aaKnown RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 FOXB2Q5VYV0 432 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CREB3L3Q68CJ9 461 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 ZNF530Q6P9A1 599 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 SARM1Q6SZW1 724 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CWC27Q6UX04 472 aaKnown RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 KSR2Q6VAB6 950 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 OTOP1Q7RTM1 612 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PLA2G4DQ86XP0 818 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 TICAM2Q86XR7 235 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 SYT12Q8IV01 421 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 KCNH5Q8NCM2 988 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 LEO1Q8WVC0 666 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 ANKRD7Q92527 254 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 GTF3C6Q969F1 213 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 KAZALD1Q96I82 304 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 SUCLG2Q96I99 432 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CCDC94Q9BW85 323 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 AGXT2Q9BYV1 514 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PITHD1Q9GZP4 211 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 NUP62CLQ9H1M0 184 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CLSTN2Q9H4D0 955 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PCIF1Q9H4Z3 704 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 BICC1Q9H694 974 aaKnown RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 TTC12Q9H892 705 aaPredicted RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 CASS4Q9NQ75 786 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PDRG1Q9NUG6 133 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 INTS7Q9NVH2 962 aaKnown RBP2.86□□□□□ -1.95
SPG11-223ENST00000560858 TBCCD1Q9NVR7 557 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 NDOR1Q9UHB4 597 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PRDM4Q9UKN5 801 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 TPCN1Q9ULQ1 816 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 PYCARDQ9ULZ3 195 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 ATP11BQ9Y2G3 1177 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 NOX1Q9Y5S8 564 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 CYP46A1Q9Y6A2 500 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 SH3TC1Q8TE82 1336 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 ABCC12Q96J65 1359 aa2.86□□□□□ -1.95
SPG11-223ENST00000560858 VPS37CA5D8V6 355 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 MARCH11A6NNE9 402 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 TBKBP1A7MCY6 615 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 B5MCH6 92 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 KLF4O43474 513 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 KCNQ3O43525 872 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 OPHN1O60890 802 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 TAF5LO75529 589 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 APOL3O95236 402 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 DDX58O95786 925 aaKnown RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 CAVIN2O95810 425 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 MAP4K4O95819 1239 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 CFIP05156 583 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 IGKV5-2P06315 115 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 FGRP09769 529 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 IFIT2P09913 472 aaKnown RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 CCKBRP32239 447 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 RFX5P48382 616 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 ZNF75DP51815 510 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 APBA1Q02410 837 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 SSRP1Q08945 709 aaKnown RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 TEFQ10587 303 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 KRT32Q14532 448 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 ZNF174Q15697 407 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 PROSER3Q2NL68 480 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 PLEKHO1Q53GL0 409 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 FAM102AQ5T9C2 384 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 GIMAP6Q6P9H5 292 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 BLOC1S2Q6QNY1 142 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 SPATC1Q76KD6 591 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 GPR149Q86SP6 731 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 ZNF589Q86UQ0 364 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 AACSQ86V21 672 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 IGSF22Q8N9C0 903 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 EAF2Q96CJ1 260 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 FAM227BQ96M60 508 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 LLPHQ9BRT6 129 aaKnown RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 MTFR1LQ9H019 292 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 SLC52A2Q9HAB3 445 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 DDX21Q9NR30 783 aaKnown RBP eCLIP2.85□□□□□ -1.95
SPG11-223ENST00000560858 FOXJ2Q9P0K8 574 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 ARPP21Q9UBL0 812 aaPredicted RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 PA2G4Q9UQ80 394 aaKnown RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 DMTF1Q9Y222 760 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 MRPS23Q9Y3D9 190 aaKnown RBP2.85□□□□□ -1.95
SPG11-223ENST00000560858 KIF3AQ9Y496 699 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 NEDD4P46934 1319 aa2.85□□□□□ -1.95
SPG11-223ENST00000560858 DOT1LQ8TEK3 1739 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms