RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 KLRC1P26715 233 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 FOXO4P98177 505 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 UBE3AQ05086 875 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 KHDRBS2Q5VWX1 349 aaKnown RBP13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 XRRA1Q6P2D8 792 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 KDELC2Q7Z4H8 507 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 LRRC6Q86X45 466 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 ADAM33Q9BZ11 813 aa13.77□□□□□ -0.21
CSPG4P11-201ENST00000560634 NFIBO00712 420 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 TCF3P15923 654 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 SLC13A5Q86YT5 568 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ARID3BQ8IVW6 561 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ZNF512BQ96KM6 892 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 NAT9Q9BTE0 207 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 SOX13Q9UN79 622 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 SUPT3HB4E1H0 165 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 IMPDH2P12268 514 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 FDFT1P37268 417 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 CHI3L2Q15782 390 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 KIF2BQ8N4N8 673 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 CCDC126Q96EE4 140 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 WNK4Q96J92 1243 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 PLAGL2Q9UPG8 496 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 LZTS3O60299 673 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 PRLRP16471 622 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 SEPT12Q8IYM1 358 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 NOA1Q8NC60 698 aaKnown RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ZNF669Q96BR6 464 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 NOD2Q9HC29 1040 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 GIMAP4Q9NUV9 329 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ANXA9O76027 345 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 GUCA1CO95843 209 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 THRAP10827 490 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 RGS2P41220 211 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 TP53BP2Q13625 1128 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ARHGEF7Q14155 803 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ITIH4Q14624 930 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 FAM9CQ8IZT9 166 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 ANKEF1Q9NU02 776 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 DTNAQ9Y4J8 743 aa13.76□□□□□ -0.21
CSPG4P11-201ENST00000560634 LOC102724159A0A0B4J2E5 919 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 TRIM49D1C9J1S8 452 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 MUTP22033 750 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 PWP2Q15269 919 aaKnown RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 WDR93Q6P2C0 686 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 DCP1BQ8IZD4 617 aaKnown RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 C17orf75Q9HAS0 396 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 GLRA3O75311 464 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 H2AFYO75367 372 aaKnown RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 NR3C2P08235 984 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 SCARF1Q14162 830 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 DDHD1Q8NEL9 900 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 USP33Q8TEY7 942 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 BTN2A2Q8WVV5 523 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 SH3GL2Q99962 352 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 C17orf80Q9BSJ5 609 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 IGSF9BQ9UPX0 1349 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 PSMA4P25789 261 aaKnown RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 KCNJ1P48048 391 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 MAPK7Q13164 816 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 SLC7A5P2Q9GIP4 190 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 CAAP1Q9H8G2 361 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 EFCAB1Q9HAE3 211 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 IL1RAPL1Q9NZN1 696 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 EXTL3O43909 919 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 ENTPD3O75355 529 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 NDUFB10O96000 172 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 RARBP10826 455 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 GNL1P36915 607 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 HSD17B3P37058 310 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 CACNB2Q08289 660 aaPredicted RBP13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 TTLL9Q3SXZ7 439 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 SV2CQ496J9 727 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 SLC44A4Q53GD3 710 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 ADCK2Q7Z695 626 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 RDM1Q8NG50 284 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 KATNAL1Q9BW62 490 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 IMPAD1Q9NX62 359 aa13.75□□□□□ -0.21
CSPG4P11-201ENST00000560634 SNTNA6NMZ2 147 aa13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 XPO1O14980 1071 aaKnown RBP13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 MAP3K13O43283 966 aa13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 USP1O94782 785 aa13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 MYBP10242 640 aa13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 PYGMP11217 842 aa13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 HNRNPH1P31943 449 aaKnown RBP13.74□□□□□ -0.21
CSPG4P11-201ENST00000560634 HPCAP84074 193 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms