RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CYP3A5P20815 502 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 NMT1P30419 496 aaKnown RBP18.02■□□□□ 0.48
HERC1-207ENST00000560316 TNFSF9P41273 254 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 MATR3P43243 847 aaKnown RBP eCLIP18.02■□□□□ 0.484e-6■■□□□ 11.8
HERC1-207ENST00000560316 FXR2P51116 673 aaKnown RBP eCLIP18.02■□□□□ 0.482e-10■■■□□ 16.1
HERC1-207ENST00000560316 MCL1Q07820 350 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 KARSQ15046 597 aaKnown RBP18.02■□□□□ 0.48
HERC1-207ENST00000560316 TAF12Q16514 161 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 RINT1Q6NUQ1 792 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 MAB21L3Q8N8X9 362 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 SNX29Q8TEQ0 813 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 SENP8Q96LD8 212 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 P2RY13Q9BPV8 354 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 TMEM9BQ9NQ34 198 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 HSFX1Q9UBD0 423 aa18.02■□□□□ 0.48
HERC1-207ENST00000560316 ABCA7Q8IZY2 2146 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 CDX4O14627 284 aaPredicted RBP18.01■□□□□ 0.47
HERC1-207ENST00000560316 KHNYNO15037 678 aaKnown RBP18.01■□□□□ 0.47
HERC1-207ENST00000560316 CLDN3O15551 220 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 CLTAP09496 248 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 ODC1P11926 461 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 DRD1P21728 446 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 AVPR1AP37288 418 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 TUFMP49411 452 aaKnown RBP18.01■□□□□ 0.47
HERC1-207ENST00000560316 DGKEP52429 567 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 LILRA4P59901 499 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 RING1Q06587 406 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 RAD51AP2Q09MP3 1159 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 BFSP1Q12934 665 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 DMC1Q14565 340 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 ANKRD1Q15327 319 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 SAFBQ15424 915 aaKnown RBP eCLIP18.01■□□□□ 0.47
HERC1-207ENST00000560316 TTC38Q5R3I4 469 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 KIAA1211LQ6NV74 962 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 LRSAM1Q6UWE0 723 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 C1orf186Q6ZWK4 172 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 SYT13Q7L8C5 426 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 TMEM150AQ86TG1 271 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 C4orf32Q8N8J7 132 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 TMEM161BQ8NDZ6 487 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 ZCCHC14Q8WYQ9 949 aaKnown RBP18.01■□□□□ 0.47
HERC1-207ENST00000560316 EZH1Q92800 747 aaPredicted RBP18.01■□□□□ 0.47
HERC1-207ENST00000560316 EBF1Q9UH73 591 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 DNM3Q9UQ16 869 aa18.01■□□□□ 0.47
HERC1-207ENST00000560316 MAPTP10636 758 aaKnown RBP18■□□□□ 0.47
HERC1-207ENST00000560316 CSRP1P21291 193 aaKnown RBP18■□□□□ 0.47
HERC1-207ENST00000560316 GJA4P35212 333 aa18■□□□□ 0.47
HERC1-207ENST00000560316 AMPD2Q01433 879 aa18■□□□□ 0.47
HERC1-207ENST00000560316 PPP2R3AQ06190 1150 aa18■□□□□ 0.47
HERC1-207ENST00000560316 PSMD2Q13200 908 aa18■□□□□ 0.47
HERC1-207ENST00000560316 ORC2Q13416 577 aaPredicted RBP18■□□□□ 0.47
HERC1-207ENST00000560316 NBR1Q14596 966 aa18■□□□□ 0.47
HERC1-207ENST00000560316 UAP1L1Q3KQV9 507 aa18■□□□□ 0.47
HERC1-207ENST00000560316 FBXO43Q4G163 708 aa18■□□□□ 0.47
HERC1-207ENST00000560316 PMS2CLQ68D20 193 aa18■□□□□ 0.47
HERC1-207ENST00000560316 TXNDC8Q6A555 127 aa18■□□□□ 0.47
HERC1-207ENST00000560316 KCNK18Q7Z418 384 aa18■□□□□ 0.47
HERC1-207ENST00000560316 DEFB124Q8NES8 71 aa18■□□□□ 0.47
HERC1-207ENST00000560316 NTPCRQ9BSD7 190 aaKnown RBP18■□□□□ 0.47
HERC1-207ENST00000560316 TPSD1Q9BZJ3 242 aa18■□□□□ 0.47
HERC1-207ENST00000560316 ZCWPW1Q9H0M4 648 aa18■□□□□ 0.47
HERC1-207ENST00000560316 C17orf75Q9HAS0 396 aa18■□□□□ 0.47
HERC1-207ENST00000560316 TDP1Q9NUW8 608 aa18■□□□□ 0.47
HERC1-207ENST00000560316 TBX20Q9UMR3 447 aa18■□□□□ 0.47
HERC1-207ENST00000560316 LHX6Q9UPM6 363 aa18■□□□□ 0.47
HERC1-207ENST00000560316 NUP205Q92621 2012 aa17.99■□□□□ 0.47
HERC1-207ENST00000560316 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
HERC1-207ENST00000560316 IRX4P78413 519 aa17.99■□□□□ 0.47
HERC1-207ENST00000560316 CC2D1AQ6P1N0 951 aaPredicted RBP17.99■□□□□ 0.47
HERC1-207ENST00000560316 ZPBP2Q6X784 338 aa17.99■□□□□ 0.47
HERC1-207ENST00000560316 STKLD1Q8NE28 680 aa17.99■□□□□ 0.47
HERC1-207ENST00000560316 DMXL2Q8TDJ6 3036 aa17.99■□□□□ 0.47
HERC1-207ENST00000560316 DSPP15924 2871 aaKnown RBP17.98■□□□□ 0.47
HERC1-207ENST00000560316 XPOTO43592 962 aaKnown RBP17.98■□□□□ 0.47
HERC1-207ENST00000560316 HYAL3O43820 417 aaPredicted RBP17.98■□□□□ 0.47
HERC1-207ENST00000560316 F11P03951 625 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 PLS3P13797 630 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 BCKDHBP21953 392 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 CDC25AP30304 524 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 NLRP12P59046 1061 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 ENOX2Q16206 610 aaKnown RBP17.98■□□□□ 0.47
HERC1-207ENST00000560316 CYP2U1Q7Z449 544 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 LRRTM3Q86VH5 581 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 IGSF22Q8N9C0 903 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 SPIRE2Q8WWL2 714 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 ACDQ96AP0 544 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 BICD1Q96G01 975 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 ZMYM5Q9UJ78 669 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 TSC2P49815 1807 aa17.98■□□□□ 0.47
HERC1-207ENST00000560316 HAPLN1P10915 354 aaPredicted RBP17.97■□□□□ 0.47
HERC1-207ENST00000560316 HMGA1P17096 107 aaKnown RBP17.97■□□□□ 0.47
HERC1-207ENST00000560316 SMTNP53814 917 aa17.97■□□□□ 0.47
HERC1-207ENST00000560316 ST3GAL1Q11201 340 aa17.97■□□□□ 0.47
HERC1-207ENST00000560316 PDIA5Q14554 519 aa17.97■□□□□ 0.47
HERC1-207ENST00000560316 PDGFRLQ15198 375 aa17.97■□□□□ 0.47
HERC1-207ENST00000560316 USP39Q53GS9 565 aaKnown RBP17.97■□□□□ 0.47
HERC1-207ENST00000560316 SPATA1Q5VX52 437 aa17.97■□□□□ 0.47
HERC1-207ENST00000560316 C9orf57Q5W0N0 161 aa17.97■□□□□ 0.47
HERC1-207ENST00000560316 TSTD1Q8NFU3 115 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms