RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ARHGEF19Q8IW93 802 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 CRYBG2Q8N1P7 616 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 IQCDQ96DY2 449 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 CDX2Q99626 313 aaPredicted RBP13.09□□□□□ -0.31
USP8-209ENST00000560297 RTP3Q9BQQ7 232 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 TRIM5Q9C035 493 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 XPO4Q9C0E2 1151 aaKnown RBP13.09□□□□□ -0.31
USP8-209ENST00000560297 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 FAM207AQ9NSI2 230 aaPredicted RBP13.09□□□□□ -0.31
USP8-209ENST00000560297 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 MTCH2Q9Y6C9 303 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 CDY1Q9Y6F8 540 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 CSPG5O95196 566 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 PTPN1P18031 435 aaKnown RBP13.08□□□□□ -0.32
USP8-209ENST00000560297 RPL17P18621 184 aaKnown RBP13.08□□□□□ -0.32
USP8-209ENST00000560297 CD58P19256 250 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 NDST1P52848 882 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 GPR17Q13304 367 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 ADGRE1Q14246 886 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 NFE2Q16621 373 aaPredicted RBP13.08□□□□□ -0.32
USP8-209ENST00000560297 INTS6LQ5JSJ4 861 aaKnown RBP13.08□□□□□ -0.32
USP8-209ENST00000560297 FAM171BQ6P995 826 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 ELMSAN1Q6PJG2 1045 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 Q7L0L9 218 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 RTL10Q7L3V2 364 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 ZNF461Q8TAF7 563 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 KREMEN1Q96MU8 473 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 ARID3AQ99856 593 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 STK33Q9BYT3 514 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 DPP7Q9UHL4 492 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 KIAA1257Q9ULG3 409 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 CNTN6Q9UQ52 1028 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 PCDHB4Q9Y5E5 795 aa13.08□□□□□ -0.32
USP8-209ENST00000560297 CHD9Q3L8U1 2897 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 CLASP2O75122 1294 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 NOL4O94818 638 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 ABLIM3O94929 683 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 PAEPP09466 180 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 CPB1P15086 417 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 ACO1P21399 889 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 PBX1P40424 430 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 KLK7P49862 253 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 ARPP19P56211 112 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 APBA1Q02410 837 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 DUSP6Q16828 381 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 ARHGAP44Q17R89 818 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 FIGNQ5HY92 759 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 IQCEQ6IPM2 695 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 GJB7Q6PEY0 223 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 LILRA6Q6PI73 481 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 TMEM270Q6UE05 265 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 RSPO2Q6UXX9 243 aaPredicted RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 RBM23Q86U06 439 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 FMNL3Q8IVF7 1028 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 UBR7Q8N806 425 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 MYCBPAPQ8TBZ2 947 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 C2orf15Q8WU43 125 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 HDAC7Q8WUI4 952 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 KAT5Q92993 513 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 TMEM176AQ96HP8 235 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 SYT15Q9BQS2 421 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 NAA15Q9BXJ9 866 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 GANQ9H2C0 597 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 CEP72Q9P209 647 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 HSFX1Q9UBD0 423 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
USP8-209ENST00000560297 PCDHGC5Q9Y5F6 944 aa13.07□□□□□ -0.32
USP8-209ENST00000560297 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.07□□□□□ -0.324e-6■□□□□ 9.8
USP8-209ENST00000560297 NLRC5Q86WI3 1866 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 MYO9BQ13459 2157 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 GOLGA6L3A6NEY3 463 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 PER2O15055 1255 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 ADAM12O43184 909 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 GLUD1P00367 558 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 KRT5P13647 590 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 ATF2P15336 505 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 ACAT1P24752 427 aaKnown RBP13.06□□□□□ -0.32
USP8-209ENST00000560297 ELF1P32519 619 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 NRIP1P48552 1158 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 CLCN4P51793 760 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 RAD23BP54727 409 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 BPIFB4P59827 614 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 ROR1Q01973 937 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 RAPGEF1Q13905 1077 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 DRAP1Q14919 205 aaPredicted RBP13.06□□□□□ -0.32
USP8-209ENST00000560297 TCEAL5Q5H9L2 206 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 C4orf50Q6ZRC1 276 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 ADGRD2Q7Z7M1 963 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 ACOT1Q86TX2 421 aa13.06□□□□□ -0.32
USP8-209ENST00000560297 LRRTM3Q86VH5 581 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms