RNA–Protein interactions for RNA: ENST00000559642.1

BMP4-208, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-208ENST00000559642 KBTBD7Q8WVZ9 684 aa13.84□□□□□ -0.19
BMP4-208ENST00000559642 ZNF334Q9HCZ1 680 aaPredicted RBP13.84□□□□□ -0.19
BMP4-208ENST00000559642 AVENQ9NQS1 362 aaPredicted RBP13.84□□□□□ -0.19
BMP4-208ENST00000559642 ZFP37Q9Y6Q3 630 aaPredicted RBP13.84□□□□□ -0.19
BMP4-208ENST00000559642 COL4A3Q01955 1670 aa13.84□□□□□ -0.19
BMP4-208ENST00000559642 GABRDO14764 452 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 PHACTR2O75167 634 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 CLSTN1O94985 981 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 CFHP08603 1231 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 ANP32AP39687 249 aaKnown RBP13.83□□□□□ -0.2
BMP4-208ENST00000559642 GPR15P49685 360 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 EPHB3P54753 998 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 EPHA5P54756 1037 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 PSMC1P62191 440 aaKnown RBP13.83□□□□□ -0.2
BMP4-208ENST00000559642 MYL7Q01449 175 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 TRPC3Q13507 836 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 ZCWPW2Q504Y3 356 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 CYP4A22Q5TCH4 519 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 LIMS2Q7Z4I7 341 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 BMP8AQ7Z5Y6 402 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 STKLD1Q8NE28 680 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 SHKBP1Q8TBC3 707 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 FAM200AQ8TCP9 573 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 GPR152Q8TDT2 470 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 TMEM174Q8WUU8 243 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 SMARCE1Q969G3 411 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 TIGD1Q96MW7 591 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 PKMYT1Q99640 499 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 MRPL45Q9BRJ2 306 aaKnown RBP13.83□□□□□ -0.2
BMP4-208ENST00000559642 PI4K2AQ9BTU6 479 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 LRRC3Q9BY71 257 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 XYLT2Q9H1B5 865 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 RMND1Q9NWS8 449 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 FRMD4BQ9Y2L6 1034 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 HCN4Q9Y3Q4 1203 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 PCDHB5Q9Y5E4 795 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 PCDHA5Q9Y5H7 936 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 TRIOO75962 3097 aa13.83□□□□□ -0.2
BMP4-208ENST00000559642 OBSL1O75147 1896 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 PTPRDP23468 1912 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 KINO60870 393 aaKnown RBP13.82□□□□□ -0.2
BMP4-208ENST00000559642 ATP2C2O75185 946 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 AKAP3O75969 853 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 SMC2O95347 1197 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 VNN1O95497 513 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 TRIM49P0CI25 452 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 TRIM49CP0CI26 452 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 HAPLN1P10915 354 aaPredicted RBP13.82□□□□□ -0.2
BMP4-208ENST00000559642 LMO2P25791 158 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 PRCPP42785 496 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 VCPP55072 806 aaKnown RBP13.82□□□□□ -0.2
BMP4-208ENST00000559642 TNNC1P63316 161 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 CLDN10P78369 228 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 TEAD2Q15562 447 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 NFIL3Q16649 462 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 SDHAF4Q5VUM1 108 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 MTSS1LQ765P7 747 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
BMP4-208ENST00000559642 FBXL6Q8N531 539 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 C2orf15Q8WU43 125 aaKnown RBP13.82□□□□□ -0.2
BMP4-208ENST00000559642 NXPE3Q969Y0 559 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 ZSWIM3Q96MP5 696 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 SYT15Q9BQS2 421 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 ACBD6Q9BR61 282 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 HSFX1Q9UBD0 423 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 NXF1Q9UBU9 619 aaKnown RBP13.82□□□□□ -0.2
BMP4-208ENST00000559642 GTF3C4Q9UKN8 822 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 FBXL21Q9UKT6 434 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 NME7Q9Y5B8 376 aa13.82□□□□□ -0.2
BMP4-208ENST00000559642 ZNF318Q5VUA4 2279 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
BMP4-208ENST00000559642 A0A1W2PRU2 124 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 ZNF197O14709 1029 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 C4BPAP04003 597 aaKnown RBP13.81□□□□□ -0.2
BMP4-208ENST00000559642 SRFP11831 508 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 WARSP23381 471 aaKnown RBP13.81□□□□□ -0.2
BMP4-208ENST00000559642 FCARP24071 287 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 PCSK1P29120 753 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 RAP1GAPP47736 663 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 LHX1P48742 406 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 TUFMP49411 452 aaKnown RBP13.81□□□□□ -0.2
BMP4-208ENST00000559642 SMARCB1Q12824 385 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 NCOA4Q13772 614 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 ZNF699Q32M78 642 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 WDR72Q3MJ13 1102 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 STXBP5Q5T5C0 1151 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 ZNF658Q5TYW1 1059 aaPredicted RBP13.81□□□□□ -0.2
BMP4-208ENST00000559642 ISM2Q6H9L7 571 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 SCARA5Q6ZMJ2 495 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 DPH6Q7L8W6 267 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 DNAJB7Q7Z6W7 309 aaPredicted RBP13.81□□□□□ -0.2
BMP4-208ENST00000559642 FAM186BQ8IYM0 893 aa13.81□□□□□ -0.2
BMP4-208ENST00000559642 SIX5Q8N196 739 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms