RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	MRPL58	Q14197	206 aa	Known RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	KYAT1	Q16773	422 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	CCDC40	Q4G0X9	1142 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	GJB7	Q6PEY0	223 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	LILRA6	Q6PI73	481 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	SLC9A9	Q8IVB4	645 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	HS6ST3	Q8IZP7	471 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	C12orf29	Q8N999	325 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	GIPC2	Q8TF65	315 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	CACTIN	Q8WUQ7	758 aa	Known RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	TWNK	Q96RR1	684 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	COL25A1	Q9BXS0	654 aa	Predicted RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	RXFP1	Q9HBX9	757 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	CD207	Q9UJ71	328 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	PCDHB8	Q9UN66	801 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	TBC1D4	O60343	1298 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ASGR2	P07307	311 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	SCP2	P22307	547 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	CYP2F1	P24903	491 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ZNF699	Q32M78	642 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ZACN	Q401N2	412 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	CD302	Q8IX05	232 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ADGRF2	Q8IZF7	708 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	TTC16	Q8NEE8	873 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	OR6B3	Q8NGW1	331 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	GOLGA5	Q8TBA6	731 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ADAMTS19	Q8TE59	1207 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	SLC35C1	Q96A29	364 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ZNF707	Q96C28	371 aa	Predicted RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	TCEAL4	Q96EI5	215 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	SEPT5	Q99719	369 aa	Predicted RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	TSG101	Q99816	390 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	YY1AP1	Q9H869	796 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	ITGA11	Q9UKX5	1188 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	PRRG1	O14668	218 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	XPOT	O43592	962 aa	Known RBP	10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	EPB41	P11171	864 aa	Known RBP	10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	ODC1	P11926	461 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	KRT13	P13646	458 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	NLRP12	P59046	1061 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	DDR2	Q16832	855 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	SLC5A9	Q2M3M2	681 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	EDRF1	Q3B7T1	1238 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	STXBP5	Q5T5C0	1151 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	ANKS3	Q6ZW76	656 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	APPL2	Q8NEU8	664 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	RSAD2	Q8WXG1	361 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	DHTKD1	Q96HY7	919 aa	Predicted RBP	10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	KIAA1586	Q9HCI6	787 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	ACP6	Q9NPH0	428 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	DERA	Q9Y315	318 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	LAMA1	P25391	3075 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	DOCK8	Q8NF50	2099 aa		10.83	□□□□□ -0.68
FAM227B-208	ENST00000559573	HUS1	O60921	280 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	PNMA6A	P0CW24	399 aa	Predicted RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	RPL13	P26373	211 aa	Known RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CCR2	P41597	374 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	TWF1	Q12792	350 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	IFRD2	Q12894	506 aa	Predicted RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	STIM1	Q13586	685 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	COL19A1	Q14993	1142 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	SV2C	Q496J9	727 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	C15orf39	Q6ZRI6	1047 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	RRAGA	Q7L523	313 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CCDC112	Q8NEF3	446 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ITFG1	Q8TB96	612 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	PPP2R3C	Q969Q6	453 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	JAKMIP2	Q96AA8	810 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CNOT6L	Q96LI5	555 aa	Known RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	FUCA2	Q9BTY2	467 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CRTAC1	Q9NQ79	661 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	FAM49B	Q9NUQ9	324 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CEP72	Q9P209	647 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	PES1	O00541	588 aa	Known RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	OAZ2	O95190	189 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	KLK7	P49862	253 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CYP27A1	Q02318	531 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	BMS1	Q14692	1282 aa	Known RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	MGAT5B	Q3V5L5	792 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ANO6	Q4KMQ2	910 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	SLC8B1	Q6J4K2	584 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZNF280D	Q6N043	979 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	GET4	Q7L5D6	327 aa	Predicted RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ACOT1	Q86TX2	421 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	ZNF461	Q8TAF7	563 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	SMG7	Q92540	1137 aa	Known RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	CORO1B	Q9BR76	489 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	RPP25	Q9BUL9	199 aa	Known RBP	10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	PIDD1	Q9HB75	910 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	SPEG	Q15772	3267 aa		10.82	□□□□□ -0.68
FAM227B-208	ENST00000559573	MTMR11	A4FU01	709 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	SYN3	O14994	580 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	CCDC130	P13994	396 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	ASPA	P45381	313 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	MXI1	P50539	228 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	CLDN10	P78369	228 aa		10.81	□□□□□ -0.68
FAM227B-208	ENST00000559573	COL4A3	Q01955	1670 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms