RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 HLA-EP13747 358 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 GCFC2P16383 781 aaKnown RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 DDX6P26196 483 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 TUFMP49411 452 aaKnown RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 ZNF33AQ06730 810 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 SOX4Q06945 474 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 GPR17Q13304 367 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 MTF1Q14872 753 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 MGAT5BQ3V5L5 792 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 ATF7IP2Q5U623 682 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 CREB3L3Q68CJ9 461 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 NAIF1Q69YI7 327 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 GLRX5Q86SX6 157 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 MAB21L3Q8N8X9 362 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 MCPH1Q8NEM0 835 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 BEST2Q8NFU1 509 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 MRPS31Q92665 395 aaKnown RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 NXPE2Q96DL1 559 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 TCEANC2Q96MN5 208 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 NACC1Q96RE7 527 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 SLC26A6Q9BXS9 759 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 SLC46A2Q9BY10 475 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 RNF26Q9BY78 433 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 FAM124BQ9H5Z6 455 aaPredicted RBP10.56□□□□□ -0.72
SMAD3-211ENST00000559460 PRORYQ9H606 182 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 SH3GLB2Q9NR46 395 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 PCDHA4Q9UN74 947 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 BPTFQ12830 3046 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 ACACAQ13085 2346 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 CACNA1EQ15878 2313 aa10.56□□□□□ -0.72
SMAD3-211ENST00000559460 ABCA7Q8IZY2 2146 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 A0A1W2PQD8 194 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 TCRBV21S2A2A0A5A6 115 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 MTMR11A4FU01 709 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 TTLL13PA6NNM8 815 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 E9PAM4 449 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 GSPT1P15170 499 aaKnown RBP10.55□□□□□ -0.72
SMAD3-211ENST00000559460 ATP2B1P20020 1258 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 ITPKBP27987 946 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 RARRES1P49788 294 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 OSTNP61366 133 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 MRPS21P82921 87 aaKnown RBP10.55□□□□□ -0.72
SMAD3-211ENST00000559460 PPP2R5AQ15172 486 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 INF2Q27J81 1249 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 EOGTQ5NDL2 527 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 SYCP2LQ5T4T6 812 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 EEF1DP3Q658K8 133 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 CENPPQ6IPU0 288 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 DHX32Q7L7V1 743 aaKnown RBP10.55□□□□□ -0.72
SMAD3-211ENST00000559460 SLCO6A1Q86UG4 719 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 BLIDQ8IZY5 108 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 DEFB119Q8N690 84 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 FAM181AQ8N9Y4 354 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 ENGASEQ8NFI3 743 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 USP13Q92995 863 aaPredicted RBP10.55□□□□□ -0.72
SMAD3-211ENST00000559460 NAP1L4Q99733 375 aaKnown RBP10.55□□□□□ -0.72
SMAD3-211ENST00000559460 CDC6Q99741 560 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 LPIN3Q9BQK8 851 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 PI4K2AQ9BTU6 479 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 ZDHHC5Q9C0B5 715 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 GPRC5CQ9NQ84 441 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 PCOLCE2Q9UKZ9 415 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 CCL26Q9Y258 94 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
SMAD3-211ENST00000559460 ATG2BQ96BY7 2078 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 LAMA5O15230 3695 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 CCNT1O60563 726 aaKnown RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 SOAT2O75908 522 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 KLF8O95600 359 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 NFATC1O95644 943 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 HSPA4P34932 840 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 GRM5P41594 1212 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 NAMPTP43490 491 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 MYBPC2Q14324 1141 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 HSF5Q4G112 596 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 CCDC157Q569K6 752 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 DSTYKQ6XUX3 929 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 SLFN12Q8IYM2 578 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 TRIM22Q8IYM9 498 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 FRMD1Q8N878 549 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 TXNDC5Q8NBS9 432 aaKnown RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 ATAD1Q8NBU5 361 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 OSCP1Q8WVF1 389 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 EZH1Q92800 747 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 EIF2AK1Q9BQI3 630 aaKnown RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 PRDM16Q9HAZ2 1276 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 KCNMB3Q9NPA1 279 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 HSFX1Q9UBD0 423 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 USP20Q9Y2K6 914 aa10.54□□□□□ -0.72
SMAD3-211ENST00000559460 TIMM13Q9Y5L4 95 aaPredicted RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 URB1O60287 2271 aaKnown RBP10.54□□□□□ -0.72
SMAD3-211ENST00000559460 ERVH48-1M5A8F1 160 aa10.53□□□□□ -0.72
SMAD3-211ENST00000559460 NDUFS2O75306 463 aa10.53□□□□□ -0.72
SMAD3-211ENST00000559460 WISP1O95388 367 aa10.53□□□□□ -0.72
SMAD3-211ENST00000559460 TIE1P35590 1138 aa10.53□□□□□ -0.72
SMAD3-211ENST00000559460 EIF2S3P41091 472 aaKnown RBP10.53□□□□□ -0.72
SMAD3-211ENST00000559460 EFNA5P52803 228 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms