RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 CCDC65Q8IXS2 484 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 PDCL2Q8N4E4 241 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 LRRC52Q8N7C0 313 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 PDILTQ8N807 584 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 C1orf127Q8N9H9 656 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 ZSWIM2Q8NEG5 633 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 GIPC2Q8TF65 315 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
LRRC28-213ENST00000559399 TASP1Q9H6P5 420 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-213ENST00000559399 LMAN1LQ9HAT1 526 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 IL21Q9HBE4 155 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 AGAP1Q9UPQ3 857 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 PTPRZ1P23471 2315 aaPredicted RBP16.09■□□□□ 0.17
LRRC28-213ENST00000559399 GVINP1Q7Z2Y8 2422 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 CITO14578 2027 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 DOCK6Q96HP0 2047 aa16.09■□□□□ 0.17
LRRC28-213ENST00000559399 RIF1Q5UIP0 2472 aaKnown RBP16.08■□□□□ 0.17
LRRC28-213ENST00000559399 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 SLC38A8A6NNN8 435 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 HUS1O60921 280 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 LILRB5O75023 590 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 PRPF6O94906 941 aaKnown RBP16.08■□□□□ 0.16
LRRC28-213ENST00000559399 PRAMEF12O95522 483 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 CHRNB1P11230 501 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 WEE1P30291 646 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 CCR3P51677 355 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 LRRC32Q14392 662 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 NFE2Q16621 373 aaPredicted RBP16.08■□□□□ 0.16
LRRC28-213ENST00000559399 STXBP4Q6ZWJ1 553 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 ERMP1Q7Z2K6 904 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 NOC3LQ8WTT2 800 aaKnown RBP16.08■□□□□ 0.16
LRRC28-213ENST00000559399 LRRC3BQ96PB8 259 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 LRRC27Q9C0I9 530 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 EPC1Q9H2F5 836 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 NCDNQ9UBB6 729 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 ZMYM5Q9UJ78 669 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 ITGA11Q9UKX5 1188 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 L1RE1Q9UN81 338 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 SMG5Q9UPR3 1016 aaKnown RBP16.08■□□□□ 0.16
LRRC28-213ENST00000559399 PCDHB5Q9Y5E4 795 aa16.08■□□□□ 0.16
LRRC28-213ENST00000559399 PDCD11Q14690 1871 aaKnown RBP16.08■□□□□ 0.16
LRRC28-213ENST00000559399 TRIP11Q15643 1979 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 MYBPHLA2RUH7 354 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
LRRC28-213ENST00000559399 TMEM191BP0C7N4 346 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 SOX9P48436 509 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 PLCB2Q00722 1185 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 BFSP1Q12934 665 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 RALGPS2Q86X27 583 aaPredicted RBP16.07■□□□□ 0.16
LRRC28-213ENST00000559399 GPD1LQ8N335 351 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 DCLK2Q8N568 766 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 CSGALNACT2Q8N6G5 542 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 LINC00301Q8NCQ3 95 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 BPIFB1Q8TDL5 484 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 LEO1Q8WVC0 666 aaPredicted RBP16.07■□□□□ 0.16
LRRC28-213ENST00000559399 ZFYVE19Q96K21 471 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 MTMR12Q9C0I1 747 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 PDE11AQ9HCR9 933 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 TMLHEQ9NVH6 421 aa16.07■□□□□ 0.16
LRRC28-213ENST00000559399 DDX43Q9NXZ2 648 aaKnown RBP16.07■□□□□ 0.16
LRRC28-213ENST00000559399 FAM186AA6NE01 2351 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SPTLC2O15270 562 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 PRPF40AO75400 957 aaKnown RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 KRT19P08727 400 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 TDGF1P13385 188 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 CTHP32929 405 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 NRLP54845 237 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 RBP5P82980 135 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 MYL7Q01449 175 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 INTS6LQ5JSJ4 861 aaKnown RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 CMTM8Q8IZV2 173 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 TMEM86AQ8N2M4 240 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 CELF5Q8N6W0 485 aaKnown RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 CXorf38Q8TB03 319 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SPATA18Q8TC71 538 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SECISBP2LQ93073 1101 aaKnown RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 RMDN1Q96DB5 314 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 FAM84AQ96KN4 292 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 ZNF396Q96N95 335 aaPredicted RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 ACBD6Q9BR61 282 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 PI4K2AQ9BTU6 479 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SLC46A2Q9BY10 475 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SMG9Q9H0W8 520 aaKnown RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 ABCB6Q9NP58 842 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 THG1LQ9NWX6 298 aaKnown RBP16.06■□□□□ 0.16
LRRC28-213ENST00000559399 GDAP2Q9NXN4 497 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 GTSE1Q9NYZ3 720 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 SNX9Q9Y5X1 595 aa16.06■□□□□ 0.16
LRRC28-213ENST00000559399 PPP6R2O75170 966 aa16.05■□□□□ 0.16
LRRC28-213ENST00000559399 CSH1P0DML2 217 aa16.05■□□□□ 0.16
LRRC28-213ENST00000559399 CSH2P0DML3 217 aa16.05■□□□□ 0.16
LRRC28-213ENST00000559399 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
LRRC28-213ENST00000559399 ACAT1P24752 427 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms