RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 VITQ6UXI7 678 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 EPM2AIP1Q7L775 607 aaPredicted RBP19.1■□□□□ 0.65
TPM1-218ENST00000559281 HS2ST1Q7LGA3 356 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 FRMD5Q7Z6J6 570 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 LRRTM3Q86VH5 581 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 MFSD6LQ8IWD5 586 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 PDCL2Q8N4E4 241 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 TTC9BQ8N6N2 239 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 GLIS3Q8NEA6 775 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 MTMR12Q9C0I1 747 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 SEMA4AQ9H3S1 761 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 LTB4R2Q9NPC1 389 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 HEBP1Q9NRV9 189 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 INTS13Q9NVM9 706 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 ABI2Q9NYB9 513 aaPredicted RBP19.1■□□□□ 0.65
TPM1-218ENST00000559281 SNX9Q9Y5X1 595 aa19.1■□□□□ 0.65
TPM1-218ENST00000559281 UBE4BO95155 1302 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 HEPACAM2A8MVW5 462 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 DPYSL4O14531 572 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 HAPLN1P10915 354 aaPredicted RBP19.09■□□□□ 0.65
TPM1-218ENST00000559281 CDC25CP30307 473 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 LHX1P48742 406 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 DPH6Q7L8W6 267 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 CBWD2Q8IUF1 395 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 TOP6BLQ8N6T0 577 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 ZNF334Q9HCZ1 680 aaPredicted RBP19.09■□□□□ 0.65
TPM1-218ENST00000559281 DDX43Q9NXZ2 648 aaKnown RBP19.09■□□□□ 0.65
TPM1-218ENST00000559281 CGNQ9P2M7 1197 aaKnown RBP19.09■□□□□ 0.65
TPM1-218ENST00000559281 ZMYM5Q9UJ78 669 aa19.09■□□□□ 0.65
TPM1-218ENST00000559281 ZFHX2Q9C0A1 2572 aaPredicted RBP19.09■□□□□ 0.65
TPM1-218ENST00000559281 NOTCH4Q99466 2003 aa19.08■□□□□ 0.65
TPM1-218ENST00000559281 NRG2O14511 850 aaPredicted RBP19.08■□□□□ 0.64
TPM1-218ENST00000559281 PRPF40AO75400 957 aaKnown RBP19.08■□□□□ 0.64
TPM1-218ENST00000559281 GLULP15104 373 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 CD72P21854 359 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 PCSK1P29120 753 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 AFMP43652 599 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 PKP1Q13835 747 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 GPR158Q5T848 1215 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 ZC3H14Q6PJT7 736 aaKnown RBP19.08■□□□□ 0.64
TPM1-218ENST00000559281 GAREM2Q75VX8 874 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 WDR49Q8IV35 697 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 ARID3BQ8IVW6 561 aaPredicted RBP19.08■□□□□ 0.64
TPM1-218ENST00000559281 CXorf38Q8TB03 319 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 FNBP1Q96RU3 617 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 LPIN3Q9BQK8 851 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 BLZF1Q9H2G9 400 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 TASP1Q9H6P5 420 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 AGPAT3Q9NRZ7 376 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 SIX4Q9UIU6 781 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 L1RE1Q9UN81 338 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 MTF2Q9Y483 593 aaPredicted RBP19.08■□□□□ 0.64
TPM1-218ENST00000559281 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.64
TPM1-218ENST00000559281 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.07■□□□□ 0.64
TPM1-218ENST00000559281 TGFB1I1O43294 461 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 LAMTOR5O43504 91 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 SLFN14P0C7P3 912 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 HOXD13P35453 343 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 RPL10AP62906 217 aaKnown RBP19.07■□□□□ 0.64
TPM1-218ENST00000559281 EHHADHQ08426 723 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 SNRNP35Q16560 246 aaKnown RBP19.07■□□□□ 0.64
TPM1-218ENST00000559281 NELFCDQ8IXH7 590 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 XXYLT1Q8NBI6 393 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 RDH13Q8NBN7 331 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 CSGALNACT1Q8TDX6 532 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 GIPC2Q8TF65 315 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 LEO1Q8WVC0 666 aaPredicted RBP19.07■□□□□ 0.64
TPM1-218ENST00000559281 SCFD1Q8WVM8 642 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 HPDLQ96IR7 371 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 ABCB6Q9NP58 842 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 SPATA6Q9NWH7 488 aaPredicted RBP19.07■□□□□ 0.64
TPM1-218ENST00000559281 OBP2AQ9NY56 170 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
TPM1-218ENST00000559281 PRR23AA6NEV1 266 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 CHADO15335 359 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 LRRN2O75325 713 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 CSH1P0DML2 217 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 CSH2P0DML3 217 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 ATF6P18850 670 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 TNNI1P19237 187 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 WEE1P30291 646 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 RPS9P46781 194 aaKnown RBP19.06■□□□□ 0.64
TPM1-218ENST00000559281 CDR1P51861 262 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 MLLT6P55198 1093 aaPredicted RBP19.06■□□□□ 0.64
TPM1-218ENST00000559281 CUL4BQ13620 913 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 KNOP1Q1ED39 458 aaKnown RBP19.06■□□□□ 0.64
TPM1-218ENST00000559281 INTS6LQ5JSJ4 861 aaKnown RBP19.06■□□□□ 0.64
TPM1-218ENST00000559281 LMBRD2Q68DH5 695 aaPredicted RBP19.06■□□□□ 0.64
TPM1-218ENST00000559281 C1orf228Q6PIY5 440 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 ASCL5Q7RTU5 278 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 ADGRF2Q8IZF7 708 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 OR5B17Q8NGF7 314 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 GOLGA5Q8TBA6 731 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 FAM3CQ92520 227 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 CLDN23Q96B33 292 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 MSANTD3Q96H12 275 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 PI4K2AQ9BTU6 479 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 SLC39A2Q9NP94 309 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 ATP6V1DQ9Y5K8 247 aa19.06■□□□□ 0.64
TPM1-218ENST00000559281 GABRDO14764 452 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms