RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 CIR1Q86X95 450 aaPredicted RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 HEPHQ9BQS7 1158 aa13.18□□□□□ -0.3
CASC4-208ENST00000559151 REXO4Q9GZR2 422 aaKnown RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 RGS17Q9UGC6 210 aaPredicted RBP13.18□□□□□ -0.3
CASC4-208ENST00000559151 DCLK1O15075 740 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 SKAP2O75563 359 aaPredicted RBP13.17□□□□□ -0.3
CASC4-208ENST00000559151 PIGFQ07326 219 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 AGAP9Q5VTM2 703 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 FBXO38Q6PIJ6 1188 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
CASC4-208ENST00000559151 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 TRIB1Q96RU8 372 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 HSFX1Q9UBD0 423 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 AATKQ6ZMQ8 1374 aa13.17□□□□□ -0.3
CASC4-208ENST00000559151 A0A087WZ62 844 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 OTOL1A6NHN0 477 aaPredicted RBP13.16□□□□□ -0.3
CASC4-208ENST00000559151 RAB27BO00194 218 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 PODXLO00592 558 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 FGAP02671 866 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 A1BGP04217 495 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 BTF3P20290 206 aaKnown RBP13.16□□□□□ -0.3
CASC4-208ENST00000559151 ACVR2AP27037 513 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 APOBEC3AP31941 199 aaPredicted RBP13.16□□□□□ -0.3
CASC4-208ENST00000559151 HHEXQ03014 270 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
CASC4-208ENST00000559151 SPATA5Q8NB90 893 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 PSD4Q8NDX1 1056 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 LRIG1Q96JA1 1093 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 PNKPQ96T60 521 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 MNTQ99583 582 aa13.16□□□□□ -0.3
CASC4-208ENST00000559151 EIF2AQ9BY44 585 aaKnown RBP13.16□□□□□ -0.3
CASC4-208ENST00000559151 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
CASC4-208ENST00000559151 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 GOLGA6L3A6NEY3 463 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 HNRNPDLO14979 420 aaKnown RBP13.15□□□□□ -0.3
CASC4-208ENST00000559151 ZNF844Q08AG5 666 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 LDHAL6AQ6ZMR3 332 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 Q6ZRM9 215 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 ZNF808Q8N4W9 903 aaPredicted RBP13.15□□□□□ -0.3
CASC4-208ENST00000559151 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 PPP1R9BQ96SB3 815 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 MESP1Q9BRJ9 268 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 MAGEB5Q9BZ81 275 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 OBP2BQ9NPH6 170 aa13.15□□□□□ -0.3
CASC4-208ENST00000559151 USP15Q9Y4E8 981 aaPredicted RBP13.15□□□□□ -0.3
CASC4-208ENST00000559151 H7C4K7 107 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 CYP2C9P11712 490 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
CASC4-208ENST00000559151 SLC29A2Q14542 456 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 IQCB1Q15051 598 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 PFKFB4Q16877 469 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 PLA1AQ53H76 456 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 NAIF1Q69YI7 327 aaPredicted RBP13.14□□□□□ -0.31
CASC4-208ENST00000559151 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 OR56A1Q8NGH5 318 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 MOGAT1Q96PD6 335 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 ZSWIM1Q9BR11 485 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 GPR87Q9BY21 358 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 XYLT2Q9H1B5 865 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 TM7SF3Q9NS93 570 aa13.14□□□□□ -0.31
CASC4-208ENST00000559151 LOC102723971A0A1B0GUV8 181 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 LGALS16A8MUM7 142 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 NPHP1O15259 732 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 ZSCAN22P10073 491 aaPredicted RBP13.13□□□□□ -0.31
CASC4-208ENST00000559151 GABRB3P28472 473 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
CASC4-208ENST00000559151 ZACNQ401N2 412 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 SPOCD1Q6ZMY3 1216 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 HTR3DQ70Z44 454 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 IPO4Q8TEX9 1081 aaKnown RBP13.13□□□□□ -0.31
CASC4-208ENST00000559151 RMDN3Q96TC7 470 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 MYLK2Q9H1R3 596 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 ATP11BQ9Y2G3 1177 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 DGKBQ9Y6T7 804 aa13.13□□□□□ -0.31
CASC4-208ENST00000559151 CCDC195A0A1B0GUA6 201 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 DBX1A6NMT0 343 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 ZNF185O15231 689 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 PRICKLE3O43900 615 aaPredicted RBP13.12□□□□□ -0.31
CASC4-208ENST00000559151 TLR5O60602 858 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 RENBPP51606 427 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 ARHGEF7Q14155 803 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 GLB1LQ6UWU2 654 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
CASC4-208ENST00000559151 Q6ZSN1 163 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 ZNF354CQ86Y25 554 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 SMAP1Q8IYB5 467 aaPredicted RBP13.12□□□□□ -0.31
CASC4-208ENST00000559151 CCDC150Q8NCX0 1101 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 ZNF483Q8TF39 744 aaPredicted RBP13.12□□□□□ -0.31
CASC4-208ENST00000559151 SSBP3Q9BWW4 388 aaPredicted RBP13.12□□□□□ -0.31
CASC4-208ENST00000559151 SMOC2Q9H3U7 446 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 HEYLQ9NQ87 328 aaPredicted RBP13.12□□□□□ -0.31
CASC4-208ENST00000559151 ZSCAN32Q9NX65 697 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 CTTNBP2NLQ9P2B4 639 aa13.12□□□□□ -0.31
CASC4-208ENST00000559151 NPC1O15118 1278 aa13.11□□□□□ -0.31
CASC4-208ENST00000559151 COMTP21964 271 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms