RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 STK25O00506 426 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 GABRDO14764 452 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 KIF20AO95235 890 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 DLATP10515 647 aaKnown RBP18.91■□□□□ 0.62
SMAD3-210ENST00000559092 TNNI1P19237 187 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 HOXD11P31277 338 aaPredicted RBP18.91■□□□□ 0.62
SMAD3-210ENST00000559092 STARD6P59095 220 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 NUCB2P80303 420 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 MYL7Q01449 175 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 VEPH1Q14D04 833 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 LMBRD2Q68DH5 695 aaPredicted RBP18.91■□□□□ 0.62
SMAD3-210ENST00000559092 TANGO2Q6ICL3 276 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 TMC8Q8IU68 726 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 SLC9A9Q8IVB4 645 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 SHKBP1Q8TBC3 707 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
SMAD3-210ENST00000559092 E2F7Q96AV8 911 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 CGRRF1Q99675 332 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 ABCB6Q9NP58 842 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 DMAC2Q9NW81 257 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 DDX43Q9NXZ2 648 aaKnown RBP18.91■□□□□ 0.62
SMAD3-210ENST00000559092 PCDHB5Q9Y5E4 795 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 DOCK8Q8NF50 2099 aa18.91■□□□□ 0.62
SMAD3-210ENST00000559092 EXOC3O60645 756 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 RPN1P04843 607 aaKnown RBP18.9■□□□□ 0.62
SMAD3-210ENST00000559092 FAM163BP0C2L3 166 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 HAPLN1P10915 354 aaPredicted RBP18.9■□□□□ 0.62
SMAD3-210ENST00000559092 RFX1P22670 979 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 FCARP24071 287 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 PCSK1P29120 753 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 PRKCQQ04759 706 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 SOWAHAQ2M3V2 549 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 MGAT5BQ3V5L5 792 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 SLC44A4Q53GD3 710 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 SCARA3Q6AZY7 606 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 TTC9BQ8N6N2 239 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 FSIP1Q8NA03 581 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 KIAA0895Q8NCT3 520 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 CCDC127Q96BQ5 260 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 FAM84AQ96KN4 292 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 ZSWIM3Q96MP5 696 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 SEPT5Q99719 369 aaPredicted RBP18.9■□□□□ 0.62
SMAD3-210ENST00000559092 TBC1D17Q9HA65 648 aa18.9■□□□□ 0.62
SMAD3-210ENST00000559092 PDXKO00764 312 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 PI15O43692 258 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 AP3M2P53677 418 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 TEAD2Q15562 447 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 INTS6LQ5JSJ4 861 aaKnown RBP18.89■□□□□ 0.61
SMAD3-210ENST00000559092 KRBA2Q6ZNG9 492 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 ADGRF2Q8IZF7 708 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 FAM200AQ8TCP9 573 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 PLA2G2FQ9BZM2 168 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 KCTD10Q9H3F6 313 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 ABI2Q9NYB9 513 aaPredicted RBP18.89■□□□□ 0.61
SMAD3-210ENST00000559092 SIT1Q9Y3P8 196 aa18.89■□□□□ 0.61
SMAD3-210ENST00000559092 A0A1W2PRU2 124 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 NRG2O14511 850 aaPredicted RBP18.88■□□□□ 0.61
SMAD3-210ENST00000559092 SOAT2O75908 522 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 RHOBTB3O94955 611 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 ZNF202O95125 648 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 WEE1P30291 646 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 CLDN10P78369 228 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 DPYDQ12882 1025 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 TAF12Q16514 161 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 GAREM2Q75VX8 874 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 CCDC105Q8IYK2 499 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 ZSCAN18Q8TBC5 510 aaPredicted RBP18.88■□□□□ 0.61
SMAD3-210ENST00000559092 DEPDC1BQ8WUY9 529 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 DNASE1L2Q92874 299 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 PKMYT1Q99640 499 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 TRMT61BQ9BVS5 477 aaKnown RBP18.88■□□□□ 0.61
SMAD3-210ENST00000559092 TRPV5Q9NQA5 729 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 ZMYM5Q9UJ78 669 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 NOTCH4Q99466 2003 aa18.88■□□□□ 0.61
SMAD3-210ENST00000559092 STAU1O95793 577 aaKnown RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 CST3P01034 146 aaPredicted RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 GJA1P17302 382 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 PSMC3P17980 439 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 ATF6P18850 670 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 CDC25CP30307 473 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 ATICP31939 592 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 KCNB1Q14721 858 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 MLF2Q15773 248 aaPredicted RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 CFAP221Q4G0U5 840 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 ARHGAP15Q53QZ3 475 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 FAM171BQ6P995 826 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 DTWD2Q8NBA8 298 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 FUBP3Q96I24 572 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 LPIN3Q9BQK8 851 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 DDX23Q9BUQ8 820 aaKnown RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 GZF1Q9H116 711 aaPredicted RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 ATXN3LQ9H3M9 355 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 GOLPH3LQ9H4A5 285 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 SLITRK6Q9H5Y7 841 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 ZNF334Q9HCZ1 680 aaPredicted RBP18.87■□□□□ 0.61
SMAD3-210ENST00000559092 TMLHEQ9NVH6 421 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 CDH9Q9ULB4 789 aa18.87■□□□□ 0.61
SMAD3-210ENST00000559092 CACNA1HO95180 2353 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms