RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ADCY1Q08828 1119 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 SMAD4Q13485 552 aaKnown RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 TRPC3Q13507 836 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 BMS1Q14692 1282 aaKnown RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 SGSM1Q2NKQ1 1148 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ZSCAN23Q3MJ62 389 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ANO6Q4KMQ2 910 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 INTS6LQ5JSJ4 861 aaKnown RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 RARS2Q5T160 578 aaKnown RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 TCERG1LQ5VWI1 586 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 FAM171BQ6P995 826 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 SASS6Q6UVJ0 657 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 TMC5Q6UXY8 1006 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 EP400NLQ6ZTU2 488 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 DPH6Q7L8W6 267 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 TMEM86AQ8N2M4 240 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ATAD1Q8NBU5 361 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 FBXL13Q8NEE6 735 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 CMASQ8NFW8 434 aaPredicted RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 SLC7A14Q8TBB6 771 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 SPATA18Q8TC71 538 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 KAT5Q92993 513 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ASB2Q96Q27 587 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ADAM7Q9H2U9 754 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 SFXN1Q9H9B4 322 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 DZANK1Q9NVP4 752 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 RAB20Q9NX57 234 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 AFF4Q9UHB7 1163 aaKnown RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 FSD2A1L4K1 749 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 HUS1O60921 280 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 GNA14O95837 355 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 C8AP07357 584 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 ATF6P18850 670 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 GPR15P49685 360 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 CACNA2D1P54289 1103 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 TNNC1P63316 161 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 INCA1Q0VD86 236 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 ORC1Q13415 861 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 IQCB1Q15051 598 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 SMAD2Q15796 467 aaKnown RBP12.24□□□□□ -0.45
SNX1-204ENST00000559061 SLC39A12Q504Y0 691 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 TPGS2Q68CL5 300 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
SNX1-204ENST00000559061 GPR149Q86SP6 731 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 USP37Q86T82 979 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 ARHGEF19Q8IW93 802 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 TCEAL8Q8IYN2 117 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 HDAC7Q8WUI4 952 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 ATXN2LQ8WWM7 1075 aaKnown RBP12.24□□□□□ -0.45
SNX1-204ENST00000559061 TAF4BQ92750 862 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 ACBD6Q9BR61 282 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 NIF3L1Q9GZT8 377 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 PLEKHA4Q9H4M7 779 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 POMKQ9H5K3 350 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 SIX2Q9NPC8 291 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 FANCLQ9NW38 375 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 DACH1Q9UI36 760 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 INSL5Q9Y5Q6 135 aa12.24□□□□□ -0.45
SNX1-204ENST00000559061 DENND4CQ5VZ89 1909 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 CCDC195A0A1B0GUA6 201 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 KCNJ18B7U540 433 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 N4BP1O75113 896 aaKnown RBP12.23□□□□□ -0.45
SNX1-204ENST00000559061 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
SNX1-204ENST00000559061 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 CPB1P15086 417 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 HOXB8P17481 243 aaPredicted RBP12.23□□□□□ -0.45
SNX1-204ENST00000559061 HOXA9P31269 272 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 NTHL1P78549 312 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 DUSP4Q13115 394 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 KCNJ12Q14500 433 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 TCP11X2Q5H9J9 407 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 PAQR9Q6ZVX9 377 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 METTL23Q86XA0 190 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 AOPEPQ8N6M6 819 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 STKLD1Q8NE28 680 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 KREMEN1Q96MU8 473 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 NECAB3Q96P71 396 aaPredicted RBP12.23□□□□□ -0.45
SNX1-204ENST00000559061 MMS19Q96T76 1030 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 BPIFA3Q9BQP9 254 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 SYT15Q9BQS2 421 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 OXCT2Q9BYC2 517 aaPredicted RBP12.23□□□□□ -0.45
SNX1-204ENST00000559061 PRKD2Q9BZL6 878 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 ELOVL4Q9GZR5 314 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 CD320Q9NPF0 282 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 ZDHHC7Q9NXF8 308 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 CEP72Q9P209 647 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 GTF3C4Q9UKN8 822 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 SLC27A5Q9Y2P5 690 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 YIPF1Q9Y548 306 aa12.23□□□□□ -0.45
SNX1-204ENST00000559061 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNX1-204ENST00000559061 P4HA2O15460 535 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 CCL16O15467 120 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 STX10O60499 249 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 CILPO75339 1184 aa12.22□□□□□ -0.45
SNX1-204ENST00000559061 POU2F2P09086 479 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms