RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TNFSF13BQ9Y275 285 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 VPS9D1Q9Y2B5 631 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 SLC27A5Q9Y2P5 690 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 RALGAPA1Q6GYQ0 2036 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 WDR81Q562E7 1941 aa7.38□□□□□ -1.23
LRRC28-207ENST00000558500 APC2O95996 2303 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 OAZ2O95190 189 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 KCNE1P15382 129 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 ENGP17813 658 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 RPS6KB1P23443 525 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 MARCKSP29966 332 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 DHPSP49366 369 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 EFNA5P52803 228 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 OSTNP61366 133 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 YWHAHQ04917 246 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 GPR17Q13304 367 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 NAIF1Q69YI7 327 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 CENPPQ6IPU0 288 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 BLOC1S2Q6QNY1 142 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 PIK3AP1Q6ZUJ8 805 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 RAB44Q7Z6P3 723 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 METTL3Q86U44 580 aaKnown RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 ITIH5Q86UX2 942 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 RASSF3Q86WH2 238 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 GLIS3Q8NEA6 775 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 ADAM32Q8TC27 787 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 EZH1Q92800 747 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 KCNB2Q92953 911 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 C18orf25Q96B23 403 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 KIFC3Q9BVG8 833 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 NUSAP1Q9BXS6 441 aaKnown RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 SLC46A2Q9BY10 475 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 TPSD1Q9BZJ3 242 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 CDT1Q9H211 546 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 IL21Q9HBE4 155 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 CNTN3Q9P232 1028 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 TBX20Q9UMR3 447 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 TIMM13Q9Y5L4 95 aaPredicted RBP7.37□□□□□ -1.23
LRRC28-207ENST00000558500 CFAP46Q8IYW2 2715 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 FREM2Q5SZK8 3169 aa7.37□□□□□ -1.23
LRRC28-207ENST00000558500 LAMA1P25391 3075 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 MTMR11A4FU01 709 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 OR6C75A6NL08 312 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 M0QZQ0 153 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 TNFRSF10BO14763 440 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CPLX1O14810 134 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 SOAT2O75908 522 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 SPATA31C1P0DKV0 1188 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 ARSAP15289 507 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CYP11B2P19099 503 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 U2AF2P26368 475 aaKnown RBP eCLIP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CDC25CP30307 473 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 GJA4P35212 333 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 FAM193AP78312 1265 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 PPP2R5AQ15172 486 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 ZNF423Q2M1K9 1284 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 ZNF568Q3ZCX4 644 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 EARS2Q5JPH6 523 aaKnown RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 SLC23A3Q6PIS1 610 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 PADI6Q6TGC4 694 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 SYT12Q8IV01 421 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CMTM8Q8IZV2 173 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 TTC13Q8NBP0 860 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 ATAD1Q8NBU5 361 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 OLIG1Q8TAK6 271 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 HNRNPLLQ8WVV9 542 aaKnown RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 USP13Q92995 863 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 EXOC4Q96A65 974 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CNOT6LQ96LI5 555 aaKnown RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 GCNAQ96QF7 691 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 NACC1Q96RE7 527 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CCDC86Q9H6F5 360 aaKnown RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 TTC12Q9H892 705 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 PTPRHQ9HD43 1115 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 TMEM74BQ9NUR3 256 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 MBD1Q9UIS9 605 aaPredicted RBP7.36□□□□□ -1.23
LRRC28-207ENST00000558500 ZMYM5Q9UJ78 669 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 CCL26Q9Y258 94 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 SPAG17Q6Q759 2223 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 ZNF462Q96JM2 2506 aa7.36□□□□□ -1.23
LRRC28-207ENST00000558500 K7ERI5 159 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 LARGE1O95461 756 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 MCF2P10911 925 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 AVPR1AP37288 418 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 TXKP42681 527 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 PTGER3P43115 390 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 BFSP1Q12934 665 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 PSMD2Q13200 908 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 HNRNPDQ14103 355 aaKnown RBP7.35□□□□□ -1.23
LRRC28-207ENST00000558500 MYBPC2Q14324 1141 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 PDGFRLQ15198 375 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 CALCRLQ16602 461 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 ANO7Q6IWH7 933 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 CC2D1AQ6P1N0 951 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-207ENST00000558500 CCNI2Q6ZMN8 369 aaPredicted RBP7.35□□□□□ -1.23
LRRC28-207ENST00000558500 ARMCX6Q7L4S7 300 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 LPCAT2Q7L5N7 544 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 USP37Q86T82 979 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 CATSPER3Q86XQ3 398 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 HDDC3Q8N4P3 179 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms