RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 CNGA2Q16280 664 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 ZNF394Q53GI3 561 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 SGO2Q562F6 1265 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 SPOUT1Q5T280 376 aaKnown RBP15.83■□□□□ 0.12
VPS18-202ENST00000558474 ARHGAP17Q68EM7 881 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 OVOS1Q6IE37 1185 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 FUT10Q6P4F1 479 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 GPR65Q8IYL9 337 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 RNF168Q8IYW5 571 aaPredicted RBP15.83■□□□□ 0.12
VPS18-202ENST00000558474 SLC39A11Q8N1S5 342 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 COLGALT1Q8NBJ5 622 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 RABGGTAQ92696 567 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 IGSF21Q96ID5 467 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 TWNKQ96RR1 684 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.83■□□□□ 0.12
VPS18-202ENST00000558474 LHX5Q9H2C1 402 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 DDX43Q9NXZ2 648 aaKnown RBP15.83■□□□□ 0.12
VPS18-202ENST00000558474 INTUQ9ULD6 942 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 PCDHB12Q9Y5F1 795 aa15.83■□□□□ 0.12
VPS18-202ENST00000558474 MRPL42Q9Y6G3 142 aaKnown RBP15.83■□□□□ 0.12
VPS18-202ENST00000558474 A0A087X0T9 212 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 DDX3XO00571 662 aaKnown RBP eCLIP15.82■□□□□ 0.125e-11■■■■■ 39
VPS18-202ENST00000558474 TLL1O43897 1013 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 FAM228BP0C875 321 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 CHRNB2P17787 502 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 FGFR3P22607 806 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 IGFBP6P24592 240 aaPredicted RBP15.82■□□□□ 0.12
VPS18-202ENST00000558474 YWHAHQ04917 246 aaPredicted RBP15.82■□□□□ 0.12
VPS18-202ENST00000558474 MRPL58Q14197 206 aaKnown RBP15.82■□□□□ 0.12
VPS18-202ENST00000558474 FAM117BQ6P1L5 589 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 ZNF662Q6ZS27 426 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 ZSCAN30Q86W11 494 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 OSTM1Q86WC4 334 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 B3GALNT2Q8NCR0 500 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 OLIG1Q8TAK6 271 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 KIAA1524Q8TCG1 905 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 HASPINQ8TF76 798 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 HEXIM2Q96MH2 286 aaKnown RBP15.82■□□□□ 0.12
VPS18-202ENST00000558474 SPG21Q9NZD8 308 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 NAGPAQ9UK23 515 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 NENFQ9UMX5 172 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 CEP83Q9Y592 693 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 ADGRG1Q9Y653 693 aa15.82■□□□□ 0.12
VPS18-202ENST00000558474 MKI67P46013 3256 aaKnown RBP15.82■□□□□ 0.12
VPS18-202ENST00000558474 GOLGA6L9A6NEM1 432 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 H7C4K7 107 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 CYP1A1P04798 512 aaPredicted RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 MMEP08473 750 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 CD19P15391 556 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 PTPN1P18031 435 aaKnown RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 LMO2P25791 158 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 CDH5P33151 784 aaPredicted RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 RGS19P49795 217 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 GFPT1Q06210 699 aaPredicted RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 MTF1Q14872 753 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 ALKBH5Q6P6C2 394 aaKnown RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 LCLAT1Q6UWP7 414 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 TMCO2Q7Z6W1 182 aaPredicted RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 ACOT1Q86TX2 421 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 GLYCTKQ8IVS8 523 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 LNX1Q8TBB1 728 aaPredicted RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 SLC20A1Q8WUM9 679 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 TMEM169Q96HH4 297 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 RNPC3Q96LT9 517 aaKnown RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 GDF15Q99988 308 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 PLVAPQ9BX97 442 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 ISCUQ9H1K1 167 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 ACP6Q9NPH0 428 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 HMGXB4Q9UGU5 601 aa15.81■□□□□ 0.12
VPS18-202ENST00000558474 PUF60Q9UHX1 559 aaKnown RBP15.81■□□□□ 0.12
VPS18-202ENST00000558474 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS18-202ENST00000558474 VWA8A3KMH1 1905 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 OR6C75A6NL08 312 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 F8W810 466 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 O00370 1275 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 RTN2O75298 545 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 SOD2P04179 222 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 PDGFRBP09619 1106 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 UNGP13051 313 aaPredicted RBP15.8■□□□□ 0.12
VPS18-202ENST00000558474 BMP8BP34820 402 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 TSPY1Q01534 308 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 PLCB3Q01970 1234 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 SMARCB1Q12824 385 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 CLEC16AQ2KHT3 1053 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 CCDC122Q5T0U0 273 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 FAM171A1Q5VUB5 890 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 TAF3Q5VWG9 929 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 ZNF280DQ6N043 979 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 TOGARAM2Q6ZUX3 1019 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 ANKS3Q6ZW76 656 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 DDX53Q86TM3 631 aaKnown RBP15.8■□□□□ 0.12
VPS18-202ENST00000558474 TMEM35BQ8NCS4 154 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 TFAP2BQ92481 460 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 VCPIP1Q96JH7 1222 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 SAMD11Q96NU1 681 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 HNRNPABQ99729 332 aaKnown RBP15.8■□□□□ 0.12
VPS18-202ENST00000558474 SYT15Q9BQS2 421 aa15.8■□□□□ 0.12
VPS18-202ENST00000558474 TTPALQ9BTX7 342 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms