RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NFIL3Q16649 462 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 WHAMMP3Q1A5X7 153 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 EDRF1Q3B7T1 1238 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 PDXDC1Q6P996 788 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 FAM114A1Q8IWE2 563 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 ZC3H3Q8IXZ2 948 aaKnown RBP11.07□□□□□ -0.64
TPM1-212ENST00000558347 PLCD3Q8N3E9 789 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 NUP58Q9BVL2 599 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 PRKD2Q9BZL6 878 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 ZDHHC7Q9NXF8 308 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 SORCS3Q9UPU3 1222 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 CDY1Q9Y6F8 540 aa11.07□□□□□ -0.64
TPM1-212ENST00000558347 CLUHO75153 1309 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 A0A0B4J269 797 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 CCDC151A5D8V7 595 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 LACTBL1A8MY62 500 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 OGTO15294 1046 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 TRAPPC3O43617 180 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 FGFR1OPO95684 399 aaKnown RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 CLTAP09496 248 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 RPL9P32969 192 aaKnown RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 MTMR3Q13615 1198 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 ENOX2Q16206 610 aaKnown RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 TAF3Q5VWG9 929 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 CC2D1AQ6P1N0 951 aaPredicted RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 OTOP3Q7RTS5 596 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 BMP8AQ7Z5Y6 402 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 CSGALNACT2Q8N6G5 542 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 TMEM174Q8WUU8 243 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 HNRNPLLQ8WVV9 542 aaKnown RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 ACSF2Q96CM8 615 aaPredicted RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 KIF12Q96FN5 646 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 DNAJC7Q99615 494 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 NAPGQ99747 312 aaPredicted RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 MSTO1Q9BUK6 570 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 UBXN6Q9BZV1 441 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 TMEM206Q9H813 350 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 ARFGAP3Q9NP61 516 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 MAGEC2Q9UBF1 373 aaPredicted RBP11.06□□□□□ -0.64
TPM1-212ENST00000558347 DOCK6Q96HP0 2047 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 ANK1P16157 1881 aa11.06□□□□□ -0.64
TPM1-212ENST00000558347 ZNF318Q5VUA4 2279 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 TGFB1I1O43294 461 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 CALUO43852 315 aaPredicted RBP11.05□□□□□ -0.64
TPM1-212ENST00000558347 TBC1D4O60343 1298 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 C8AP07357 584 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 ADRB2P07550 413 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 KRT9P35527 623 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 PLA2G4AP47712 749 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 GUCY2FP51841 1108 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 SNRPFP62306 86 aaKnown RBP11.05□□□□□ -0.64
TPM1-212ENST00000558347 FKBP3Q00688 224 aaKnown RBP11.05□□□□□ -0.64
TPM1-212ENST00000558347 UBXN1Q04323 297 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 KCNA1Q09470 495 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 RAB33AQ14088 237 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 ZBTB6Q15916 424 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 ZNF569Q5MCW4 686 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
TPM1-212ENST00000558347 TEX35Q5T0J7 233 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 ANKS3Q6ZW76 656 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 IRF2BP1Q8IU81 584 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 NELFCDQ8IXH7 590 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 MSANTD4Q8NCY6 345 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 OR8K1Q8NGG5 319 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 GOLGA5Q8TBA6 731 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 CPLX3Q8WVH0 158 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 ACCSQ96QU6 501 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 MYADMQ96S97 322 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 VPS16Q9H269 839 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 PLEKHA5Q9HAU0 1116 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 CPSF3Q9UKF6 684 aaKnown RBP11.05□□□□□ -0.64
TPM1-212ENST00000558347 CAPN11Q9UMQ6 739 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 NUB1Q9Y5A7 615 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 BACE2Q9Y5Z0 518 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 DOCK8Q8NF50 2099 aa11.05□□□□□ -0.64
TPM1-212ENST00000558347 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 SYN3O14994 580 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 PDGFBP01127 241 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 ADSSP30520 456 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 LRPAP1P30533 357 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 GBP2P32456 591 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 ARHGAP25P42331 645 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 ACOT2P49753 483 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 NTHL1P78549 312 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 ROR1Q01973 937 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 MRPL58Q14197 206 aaKnown RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 MYBPC2Q14324 1141 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 KYAT1Q16773 422 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 FIGNQ5HY92 759 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 PPM1LQ5SGD2 360 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 LIN9Q5TKA1 542 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 ZNF771Q7L3S4 317 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 C12orf56Q8IXR9 622 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms