RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 PFKFB1P16118 471 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 GABRR2P28476 465 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 GDI1P31150 447 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 TSPY1Q01534 308 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 PRKCQQ04759 706 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 EHHADHQ08426 723 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 TAF12Q16514 161 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 FRMD5Q7Z6J6 570 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 ITIH5Q86UX2 942 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 DCP1BQ8IZD4 617 aaKnown RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 STKLD1Q8NE28 680 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 CXorf38Q8TB03 319 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 LEO1Q8WVC0 666 aaPredicted RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 PSMG2Q969U7 264 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 PI4K2AQ9BTU6 479 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 TRMT61BQ9BVS5 477 aaKnown RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 ATXN3LQ9H3M9 355 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 TMLHEQ9NVH6 421 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 DDX43Q9NXZ2 648 aaKnown RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 MTF2Q9Y483 593 aaPredicted RBP12.82□□□□□ -0.36
HERC1-202ENST00000558324 ASB3Q9Y575 518 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 PCDHB5Q9Y5E4 795 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 UBE4BO95155 1302 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 TCHHQ07283 1943 aa12.82□□□□□ -0.36
HERC1-202ENST00000558324 FAM170BA6NMN3 283 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 HEPACAM2A8MVW5 462 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
HERC1-202ENST00000558324 SLFN14P0C7P3 912 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 HAPLN1P10915 354 aaPredicted RBP12.81□□□□□ -0.36
HERC1-202ENST00000558324 GLULP15104 373 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 PSMC3P17980 439 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 GPR15P49685 360 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 KRT85P78386 507 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 CYP4F8P98187 520 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 SURF1Q15526 300 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 GPR158Q5T848 1215 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 SDHAF4Q5VUM1 108 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 GAREM2Q75VX8 874 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 WDR49Q8IV35 697 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 SPPL2BQ8TCT7 592 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 C2orf15Q8WU43 125 aaKnown RBP12.81□□□□□ -0.36
HERC1-202ENST00000558324 RSPRY1Q96DX4 576 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 PAGE5Q96GU1 130 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 HPDLQ96IR7 371 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 GCNAQ96QF7 691 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 KIAA1586Q9HCI6 787 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 HSFX1Q9UBD0 423 aa12.81□□□□□ -0.36
HERC1-202ENST00000558324 PVALEFA0A1B0GWK0 134 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 PRPF40AO75400 957 aaKnown RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 CLSTN1O94985 981 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 TNNI1P19237 187 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 TARSP26639 723 aaKnown RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 MYL7Q01449 175 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 CYP24A1Q07973 514 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 SMARCB1Q12824 385 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 MYO1EQ12965 1108 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 DUOXA2Q1HG44 320 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 SOWAHAQ2M3V2 549 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 ARHGAP15Q53QZ3 475 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 INTS6LQ5JSJ4 861 aaKnown RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 ARID3BQ8IVW6 561 aaPredicted RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 YAF2Q8IY57 180 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 TMEM86AQ8N2M4 240 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 TOP6BLQ8N6T0 577 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 XXYLT1Q8NBI6 393 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 DNASE1L2Q92874 299 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 IRF7Q92985 503 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 FNBP1Q96RU3 617 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 CGRRF1Q99675 332 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 DDX23Q9BUQ8 820 aaKnown RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 BCO2Q9BYV7 579 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 LTB4R2Q9NPC1 389 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 GTF3C4Q9UKN8 822 aa12.8□□□□□ -0.36
HERC1-202ENST00000558324 NDRG2Q9UN36 371 aaKnown RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 MAGED2Q9UNF1 606 aaPredicted RBP12.8□□□□□ -0.36
HERC1-202ENST00000558324 DPYSL4O14531 572 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 ZNF263O14978 683 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 KLRC4O43908 158 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 EXOC3O60645 756 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 PRAMEF12O95522 483 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 FGF19O95750 216 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 CMA1P23946 247 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 CYP2F1P24903 491 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 NBL1P41271 181 aa12.79□□□□□ -0.36
HERC1-202ENST00000558324 PSMC1P62191 440 aaKnown RBP12.79□□□□□ -0.36
HERC1-202ENST00000558324 PSMD6Q15008 389 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms