RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 RASSF3Q86WH2 238 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 AGBL3Q8NEM8 1001 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TTC17Q96AE7 1141 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 CLMNQ96JQ2 1002 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 CLPTM1LQ96KA5 538 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 THTPAQ9BU02 230 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 ANO3Q9BYT9 981 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 OSBPL8Q9BZF1 889 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 VPS33BQ9H267 617 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TDRD3Q9H7E2 651 aaKnown RBP5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TLE6Q9H808 572 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 TAS2R1Q9NYW7 299 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 CLIC5Q9NZA1 410 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 PHF24Q9UPV7 400 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 COMMD3-BMI1R4GMX3 469 aa5.34□□□□□ -1.56
HMG20A-204ENST00000558288 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ARHGAP42A6NI28 874 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ATP2A1O14983 1001 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 LDHCP07864 332 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 FGFR1P11362 822 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 IVDP26440 423 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 RPA1P27694 616 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SMARCA1P28370 1054 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 HADHBP55084 474 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 NOP14P78316 857 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 DLG4P78352 724 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PLCB3Q01970 1234 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 IKQ13123 557 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 GRIK5Q16478 980 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 C2CD6Q53TS8 623 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ODR4Q5SWX8 454 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SLC30A10Q6XR72 485 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 C16orf86Q6ZW13 317 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 STXBP4Q6ZWJ1 553 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 MYLK4Q86YV6 388 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 DENND1AQ8TEH3 1009 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 CD101Q93033 1021 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 DNAJC1Q96KC8 554 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 TTC25Q96NG3 672 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 MAK16Q9BXY0 300 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 MIS12Q9H081 205 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PICK1Q9NRD5 415 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 KLHL11Q9NVR0 708 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SENP1Q9P0U3 644 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ZNF148Q9UQR1 794 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 COL11A2P13942 1736 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 KIF13BQ9NQT8 1826 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ATP6V1G1O75348 118 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 IFNB1P01574 187 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 VIL1P09327 827 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ZSCAN5DPP0CG00 497 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SPATA31C1P0DKV0 1188 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 MYL2P10916 166 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 BMP3P12645 472 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 KRT5P13647 590 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 GAP43P17677 238 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 CD58P19256 250 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SH3BGRP55822 239 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PDIA2Q13087 525 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 MED21Q13503 144 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 RASA3Q14644 834 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 CTC1Q2NKJ3 1217 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 RIPOR1Q6ZS17 1223 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 RGS9BPQ6ZS82 235 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 TRMT1LQ7Z2T5 733 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SATL1Q86VE3 508 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 NCAPG2Q86XI2 1143 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 RASAL3Q86YV0 1011 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 APOBEC3FQ8IUX4 373 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 HIPK4Q8NE63 616 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 WDR66Q8TBY9 1149 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 CD99L2Q8TCZ2 262 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 TCP10LQ8TDR4 215 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 NAT14Q8WUY8 206 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SNRNP27Q8WVK2 155 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ELMO3Q96BJ8 720 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 HERPUD2Q9BSE4 406 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 COA1Q9GZY4 146 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 EBF3Q9H4W6 596 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PARVGQ9HBI0 331 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 AGPAT3Q9NRZ7 376 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PSMC3IPQ9P2W1 217 aaPredicted RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
HMG20A-204ENST00000558288 TMCO1Q9UM00 188 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PCDHA1Q9Y5I3 950 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 PCDHAC2Q9Y5I4 1007 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 SLC4A7Q9Y6M7 1214 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ATAD5Q96QE3 1844 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 ANKRD31Q8N7Z5 1873 aa5.33□□□□□ -1.56
HMG20A-204ENST00000558288 A8MXQ7 604 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 FCHO1O14526 889 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ZBTB39O15060 712 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ZBTB5O15062 677 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 ZSCAN9O15535 394 aaPredicted RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 RNASEH1O60930 286 aaKnown RBP5.32□□□□□ -1.56
HMG20A-204ENST00000558288 BANF1O75531 89 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 PGM3O95394 542 aa5.32□□□□□ -1.56
HMG20A-204ENST00000558288 CALCAP01258 141 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms