RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ANAPC5Q9UJX4 755 aa8.81□□□□□ -1
SPG11-209ENST00000558253 NUB1Q9Y5A7 615 aa8.81□□□□□ -1
SPG11-209ENST00000558253 ARID2Q68CP9 1835 aa8.81□□□□□ -1
SPG11-209ENST00000558253 C5orf60A6NFR6 353 aa8.8□□□□□ -1
SPG11-209ENST00000558253 SOCS7O14512 581 aa8.8□□□□□ -1
SPG11-209ENST00000558253 MEFVO15553 781 aaPredicted RBP8.8□□□□□ -1
SPG11-209ENST00000558253 STRNO43815 780 aa8.8□□□□□ -1
SPG11-209ENST00000558253 CNMDO75829 334 aa8.8□□□□□ -1
SPG11-209ENST00000558253 TTC4O95801 387 aa8.8□□□□□ -1
SPG11-209ENST00000558253 CPP00450 1065 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ABHD2P08910 425 aa8.8□□□□□ -1
SPG11-209ENST00000558253 HPDP32754 393 aaPredicted RBP8.8□□□□□ -1
SPG11-209ENST00000558253 ADCY8P40145 1251 aa8.8□□□□□ -1
SPG11-209ENST00000558253 MMP13P45452 471 aa8.8□□□□□ -1
SPG11-209ENST00000558253 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
SPG11-209ENST00000558253 IRF5Q13568 498 aa8.8□□□□□ -1
SPG11-209ENST00000558253 SLC29A2Q14542 456 aa8.8□□□□□ -1
SPG11-209ENST00000558253 PLCB4Q15147 1175 aa8.8□□□□□ -1
SPG11-209ENST00000558253 STILQ15468 1287 aa8.8□□□□□ -1
SPG11-209ENST00000558253 HADHQ16836 314 aaKnown RBP8.8□□□□□ -1
SPG11-209ENST00000558253 MORN1Q5T089 497 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ERMARDQ5T6L9 678 aa8.8□□□□□ -1
SPG11-209ENST00000558253 GKAP1Q5VSY0 366 aaPredicted RBP8.8□□□□□ -1
SPG11-209ENST00000558253 WDR78Q5VTH9 848 aa8.8□□□□□ -1
SPG11-209ENST00000558253 DNAJC24Q6P3W2 148 aa8.8□□□□□ -1
SPG11-209ENST00000558253 DCUN1D2Q6PH85 259 aa8.8□□□□□ -1
SPG11-209ENST00000558253 RHBDF2Q6PJF5 856 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ERICH1Q86X53 443 aa8.8□□□□□ -1
SPG11-209ENST00000558253 OTUD6BQ8N6M0 293 aa8.8□□□□□ -1
SPG11-209ENST00000558253 OR5B17Q8NGF7 314 aa8.8□□□□□ -1
SPG11-209ENST00000558253 MYCBPAPQ8TBZ2 947 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ZNF473Q8WTR7 871 aaKnown RBP8.8□□□□□ -1
SPG11-209ENST00000558253 ZBTB45Q96K62 511 aaPredicted RBP8.8□□□□□ -1
SPG11-209ENST00000558253 SPATA33Q96N06 139 aa8.8□□□□□ -1
SPG11-209ENST00000558253 TSPAN18Q96SJ8 248 aa8.8□□□□□ -1
SPG11-209ENST00000558253 HAPLN2Q9GZV7 340 aa8.8□□□□□ -1
SPG11-209ENST00000558253 NSRP1Q9H0G5 558 aaKnown RBP8.8□□□□□ -1
SPG11-209ENST00000558253 PLEKHA4Q9H4M7 779 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ACTR5Q9H9F9 607 aaPredicted RBP8.8□□□□□ -1
SPG11-209ENST00000558253 RPF1Q9H9Y2 349 aaKnown RBP8.8□□□□□ -1
SPG11-209ENST00000558253 VTA1Q9NP79 307 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ACP6Q9NPH0 428 aa8.8□□□□□ -1
SPG11-209ENST00000558253 CISHQ9NSE2 258 aa8.8□□□□□ -1
SPG11-209ENST00000558253 ACTL7BQ9Y614 415 aa8.8□□□□□ -1
SPG11-209ENST00000558253 FAM169AQ9Y6X4 670 aa8.8□□□□□ -1
SPG11-209ENST00000558253 COL11A1P12107 1806 aaPredicted RBP8.8□□□□□ -1
SPG11-209ENST00000558253 SIP14410 1827 aa8.8□□□□□ -1
SPG11-209ENST00000558253 UMODL1Q5DID0 1318 aa8.8□□□□□ -1
SPG11-209ENST00000558253 TCRBV5S1A1TA0A578 114 aa8.79□□□□□ -1
SPG11-209ENST00000558253 RBM47A0AV96 593 aaKnown RBP8.79□□□□□ -1
SPG11-209ENST00000558253 SIGLEC16A6NMB1 481 aa8.79□□□□□ -1
SPG11-209ENST00000558253 VGLL3A8MV65 326 aa8.79□□□□□ -1
SPG11-209ENST00000558253 E7EVH7 732 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ABLIM1O14639 778 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ITGAVP06756 1048 aa8.79□□□□□ -1
SPG11-209ENST00000558253 SRGAP2CP0DJJ0 459 aa8.79□□□□□ -1
SPG11-209ENST00000558253 RALAP11233 206 aa8.79□□□□□ -1
SPG11-209ENST00000558253 TSHRP16473 764 aa8.79□□□□□ -1
SPG11-209ENST00000558253 DESP17661 470 aa8.79□□□□□ -1
SPG11-209ENST00000558253 USP46P62068 366 aa8.79□□□□□ -1
SPG11-209ENST00000558253 LACTBP83111 547 aaPredicted RBP8.79□□□□□ -1
SPG11-209ENST00000558253 GUCY1A3Q02108 690 aa8.79□□□□□ -1
SPG11-209ENST00000558253 SNAPC2Q13487 334 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ZNF268Q14587 947 aaPredicted RBP8.79□□□□□ -1
SPG11-209ENST00000558253 STAT4Q14765 748 aa8.79□□□□□ -1
SPG11-209ENST00000558253 RASA2Q15283 850 aa8.79□□□□□ -1
SPG11-209ENST00000558253 LY6KQ17RY6 165 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ZNF699Q32M78 642 aa8.79□□□□□ -1
SPG11-209ENST00000558253 EAPPQ56P03 285 aaPredicted RBP8.79□□□□□ -1
SPG11-209ENST00000558253 ZNF667Q5HYK9 610 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ICE2Q659A1 982 aa8.79□□□□□ -1
SPG11-209ENST00000558253 MMS22LQ6ZRQ5 1243 aa8.79□□□□□ -1
SPG11-209ENST00000558253 CCDC50Q8IVM0 306 aa8.79□□□□□ -1
SPG11-209ENST00000558253 SCUBE3Q8IX30 993 aa8.79□□□□□ -1
SPG11-209ENST00000558253 THNSL1Q8IYQ7 743 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ZDHHC14Q8IZN3 488 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ZCCHC9Q8N567 271 aaKnown RBP8.79□□□□□ -1
SPG11-209ENST00000558253 ANKS4BQ8N8V4 417 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
SPG11-209ENST00000558253 AFG1LQ8WV93 481 aa8.79□□□□□ -1
SPG11-209ENST00000558253 NKD2Q969F2 451 aaPredicted RBP8.79□□□□□ -1
SPG11-209ENST00000558253 CHMP6Q96FZ7 201 aa8.79□□□□□ -1
SPG11-209ENST00000558253 BTBD6Q96KE9 485 aa8.79□□□□□ -1
SPG11-209ENST00000558253 XPO6Q96QU8 1125 aaKnown RBP8.79□□□□□ -1
SPG11-209ENST00000558253 MYCBPQ99417 103 aaPredicted RBP8.79□□□□□ -1
SPG11-209ENST00000558253 PLCD4Q9BRC7 762 aa8.79□□□□□ -1
SPG11-209ENST00000558253 C11orf70Q9BRQ4 267 aa8.79□□□□□ -1
SPG11-209ENST00000558253 TACO1Q9BSH4 297 aaKnown RBP8.79□□□□□ -1
SPG11-209ENST00000558253 BCO2Q9BYV7 579 aa8.79□□□□□ -1
SPG11-209ENST00000558253 EPB41L4BQ9H329 900 aa8.79□□□□□ -1
SPG11-209ENST00000558253 IFT122Q9HBG6 1241 aa8.79□□□□□ -1
SPG11-209ENST00000558253 RBPJLQ9UBG7 517 aa8.79□□□□□ -1
SPG11-209ENST00000558253 DERAQ9Y315 318 aa8.79□□□□□ -1
SPG11-209ENST00000558253 NEU2Q9Y3R4 380 aa8.79□□□□□ -1
SPG11-209ENST00000558253 PTPRJQ12913 1337 aa8.79□□□□□ -1
SPG11-209ENST00000558253 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
SPG11-209ENST00000558253 LIASO43766 372 aa8.78□□□□□ -1
SPG11-209ENST00000558253 CAND2O75155 1236 aa8.78□□□□□ -1
SPG11-209ENST00000558253 TOMM70O94826 608 aa8.78□□□□□ -1
SPG11-209ENST00000558253 GH1P01241 217 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms