RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 OR10T2Q8NGX3 314 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 C2orf15Q8WU43 125 aaKnown RBP17.91■□□□□ 0.46
PBX4-202ENST00000557978 KBTBD7Q8WVZ9 684 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 RTP3Q9BQQ7 232 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 S1PR5Q9H228 398 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 CYP4F11Q9HBI6 524 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 NFE2L3Q9Y4A8 694 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 ZNF638Q14966 1978 aaKnown RBP17.91■□□□□ 0.46
PBX4-202ENST00000557978 GREB1Q4ZG55 1949 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 DENND4CQ5VZ89 1909 aa17.91■□□□□ 0.46
PBX4-202ENST00000557978 GRXCR2A6NFK2 248 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 PRRG1O14668 218 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 OR4Q2P0C623 313 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 MTIF2P46199 727 aaKnown RBP17.9■□□□□ 0.46
PBX4-202ENST00000557978 NFE2Q16621 373 aaPredicted RBP17.9■□□□□ 0.46
PBX4-202ENST00000557978 SLC39A12Q504Y0 691 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 ATAT1Q5SQI0 421 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 TMC5Q6UXY8 1006 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 RNF19BQ6ZMZ0 732 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 IRF2BP1Q8IU81 584 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 C12orf76Q8N812 135 aaPredicted RBP17.9■□□□□ 0.46
PBX4-202ENST00000557978 SLC7A14Q8TBB6 771 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 RIPOR3Q96MK2 946 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 NECTIN4Q96NY8 510 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 PI4K2AQ9BTU6 479 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 RHOBTB2Q9BYZ6 727 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 DNAJC25Q9H1X3 360 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 HSFX1Q9UBD0 423 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 CDH9Q9ULB4 789 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 POLIQ9UNA4 740 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 MYO10Q9HD67 2058 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 NOTCH4Q99466 2003 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 DOCK8Q8NF50 2099 aa17.9■□□□□ 0.46
PBX4-202ENST00000557978 A8MXQ7 604 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 XYLBO75191 536 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 RFPL2O75678 378 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 PAPLNO95428 1278 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 PRKCSHP14314 528 aaPredicted RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 TRIM21P19474 475 aaKnown RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 MTHFRP42898 656 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 NFKBIBQ15653 356 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 MAPRE1Q15691 268 aaKnown RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 SMAD2Q15796 467 aaKnown RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 INTS6LQ5JSJ4 861 aaKnown RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 SPOPLQ6IQ16 392 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 SCARA5Q6ZMJ2 495 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 C11orf57Q6ZUT1 292 aaPredicted RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 GPR149Q86SP6 731 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 OSTM1Q86WC4 334 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 SPPL2BQ8TCT7 592 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 SEMA4DQ92854 862 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 PGLYRP2Q96PD5 576 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 TMEM209Q96SK2 561 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 MRPL45Q9BRJ2 306 aaKnown RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 APOL5Q9BWW9 433 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 DNAI2Q9GZS0 605 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 NIF3L1Q9GZT8 377 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 FAM124BQ9H5Z6 455 aaPredicted RBP17.89■□□□□ 0.46
PBX4-202ENST00000557978 CYP3A43Q9HB55 503 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 PIDD1Q9HB75 910 aa17.89■□□□□ 0.46
PBX4-202ENST00000557978 SYCE3A1L190 88 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 MTMR11A4FU01 709 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 LRG1P02750 347 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 ACAT1P24752 427 aaKnown RBP17.89■□□□□ 0.45
PBX4-202ENST00000557978 EEF1GP26641 437 aaKnown RBP17.89■□□□□ 0.45
PBX4-202ENST00000557978 KCNQ1P51787 676 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 MYL5Q02045 173 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 TJAP1Q5JTD0 557 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 TTC39CQ8N584 583 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 SYT15Q9BQS2 421 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 BCO2Q9BYV7 579 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 SMYD3Q9H7B4 428 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 SAMSN1Q9NSI8 373 aaKnown RBP17.89■□□□□ 0.45
PBX4-202ENST00000557978 USP15Q9Y4E8 981 aaPredicted RBP17.89■□□□□ 0.45
PBX4-202ENST00000557978 PCDHB5Q9Y5E4 795 aa17.89■□□□□ 0.45
PBX4-202ENST00000557978 KCNJ18B7U540 433 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 SEC24AO95486 1093 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 POU2F2P09086 479 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 PDGFRBP09619 1106 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 BMP1P13497 986 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 LMO2P25791 158 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 ASPAP45381 313 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 TUFMP49411 452 aaKnown RBP17.88■□□□□ 0.45
PBX4-202ENST00000557978 CDH8P55286 799 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 DUSP4Q13115 394 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 PLD1Q13393 1074 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 KCNJ12Q14500 433 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 CBX2Q14781 532 aaPredicted RBP17.88■□□□□ 0.45
PBX4-202ENST00000557978 MAN2A1Q16706 1144 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 ANO6Q4KMQ2 910 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 C4orf50Q6ZRC1 276 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 LRRTM3Q86VH5 581 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 UNC93AQ86WB7 457 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 SUSD6Q92537 303 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 SMG7Q92540 1137 aaKnown RBP17.88■□□□□ 0.45
PBX4-202ENST00000557978 ELMO3Q96BJ8 720 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 BPIFA3Q9BQP9 254 aa17.88■□□□□ 0.45
PBX4-202ENST00000557978 APOBEC3GQ9HC16 384 aaKnown RBP17.88■□□□□ 0.45
PBX4-202ENST00000557978 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms