RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 DPP7Q9UHL4 492 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 USP15Q9Y4E8 981 aaPredicted RBP15.35■□□□□ 0.05
USP3-205ENST00000557884 BRWD1Q9NSI6 2320 aa15.35■□□□□ 0.05
USP3-205ENST00000557884 VCANP13611 3396 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 PRRG1O14668 218 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 CCL16O15467 120 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 MBTPS2O43462 519 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 N4BP1O75113 896 aaKnown RBP15.34■□□□□ 0.05
USP3-205ENST00000557884 ATP2C2O75185 946 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 TACC1O75410 805 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 LETM1O95202 739 aaPredicted RBP15.34■□□□□ 0.05
USP3-205ENST00000557884 VNN2O95498 520 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 C1RP00736 705 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 GNL1P36915 607 aaPredicted RBP15.34■□□□□ 0.05
USP3-205ENST00000557884 ASPAP45381 313 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 LRMPQ12912 555 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 GPR17Q13304 367 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 AAK1Q2M2I8 961 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 ZSCAN23Q3MJ62 389 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 WDR44Q5JSH3 913 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 PPM1LQ5SGD2 360 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 FAM114A1Q8IWE2 563 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 ATAD1Q8NBU5 361 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 SPATA18Q8TC71 538 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 HDAC7Q8WUI4 952 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 ATXN2LQ8WWM7 1075 aaKnown RBP15.34■□□□□ 0.05
USP3-205ENST00000557884 ASB2Q96Q27 587 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 SYT15Q9BQS2 421 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 NIF3L1Q9GZT8 377 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 TMLHEQ9NVH6 421 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 AFF4Q9UHB7 1163 aaKnown RBP15.34■□□□□ 0.05
USP3-205ENST00000557884 SLC27A5Q9Y2P5 690 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 NME7Q9Y5B8 376 aa15.34■□□□□ 0.05
USP3-205ENST00000557884 CCDC195A0A1B0GUA6 201 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 MTMR11A4FU01 709 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 KCNJ18B7U540 433 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ZMYND10O75800 440 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ATF2P15336 505 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 PCSK1P29120 753 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 MYL5Q02045 173 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 DUSP4Q13115 394 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ORC1Q13415 861 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 KCNJ12Q14500 433 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 INTS6LQ5JSJ4 861 aaKnown RBP15.33■□□□□ 0.04
USP3-205ENST00000557884 CES5AQ6NT32 575 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 CCDC149Q6ZUS6 474 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 DCP1BQ8IZD4 617 aaKnown RBP15.33■□□□□ 0.04
USP3-205ENST00000557884 AOPEPQ8N6M6 819 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 TTC9BQ8N6N2 239 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 TATDN2Q93075 761 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ZNF707Q96C28 371 aaPredicted RBP15.33■□□□□ 0.04
USP3-205ENST00000557884 LPIN3Q9BQK8 851 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ACBD6Q9BR61 282 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 FUCA2Q9BTY2 467 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ADAM7Q9H2U9 754 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 CRISPLD1Q9H336 500 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 DPEP3Q9H4B8 488 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 ABI2Q9NYB9 513 aaPredicted RBP15.33■□□□□ 0.04
USP3-205ENST00000557884 GTF3C4Q9UKN8 822 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 COQ4Q9Y3A0 265 aa15.33■□□□□ 0.04
USP3-205ENST00000557884 C5orf42Q9H799 3197 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 MYBPHLA2RUH7 354 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 A8MXQ7 604 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 SOAT2O75908 522 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 PRKCSHP14314 528 aaPredicted RBP15.32■□□□□ 0.04
USP3-205ENST00000557884 IL9P15248 144 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 CD58P19256 250 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 CETN1Q12798 172 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 TCEAL8Q8IYN2 117 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 SMG7Q92540 1137 aaKnown RBP15.32■□□□□ 0.04
USP3-205ENST00000557884 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 NAT10Q9H0A0 1025 aaKnown RBP15.32■□□□□ 0.04
USP3-205ENST00000557884 CRTAC1Q9NQ79 661 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 FANCLQ9NW38 375 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 ZDHHC7Q9NXF8 308 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 HMGXB4Q9UGU5 601 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 CDH9Q9ULB4 789 aa15.32■□□□□ 0.04
USP3-205ENST00000557884 PES1O00541 588 aaKnown RBP15.31■□□□□ 0.04
USP3-205ENST00000557884 LRG1P02750 347 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 NDST1P52848 882 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 ITIH3Q06033 890 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 TWF1Q12792 350 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 MAN2A1Q16706 1144 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 PUS10Q3MIT2 529 aaKnown RBP15.31■□□□□ 0.04
USP3-205ENST00000557884 TCP11X2Q5H9J9 407 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 MDH1BQ5I0G3 518 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 GPR149Q86SP6 731 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 CMASQ8NFW8 434 aaPredicted RBP15.31■□□□□ 0.04
USP3-205ENST00000557884 SUSD6Q92537 303 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 MYLPFQ96A32 169 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 RIPOR3Q96MK2 946 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 PKMYT1Q99640 499 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 SEPT5Q99719 369 aaPredicted RBP15.31■□□□□ 0.04
USP3-205ENST00000557884 ARID3AQ99856 593 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 TUBGCP2Q9BSJ2 902 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 BCO2Q9BYV7 579 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 PRKD2Q9BZL6 878 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
USP3-205ENST00000557884 PIDD1Q9HB75 910 aa15.31■□□□□ 0.04
USP3-205ENST00000557884 TAB2Q9NYJ8 693 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms