RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 ZFHX2Q9C0A1 2572 aaPredicted RBP13.11□□□□□ -0.31
RCCD1-209ENST00000557750 H7C4K7 107 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 P4HA2O15460 535 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 TEX28O15482 410 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 LILRB3O75022 631 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 LRRN2O75325 713 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 CYP11A1P05108 521 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 ADH1AP07327 375 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 KLRC2P26717 231 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 PTPN5P54829 565 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 TPM4P67936 248 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 NOP14P78316 857 aaKnown RBP13.11□□□□□ -0.31
RCCD1-209ENST00000557750 CBX2Q14781 532 aaPredicted RBP13.11□□□□□ -0.31
RCCD1-209ENST00000557750 IQCB1Q15051 598 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 SOWAHAQ2M3V2 549 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 VWA3BQ502W6 1294 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 SCARA5Q6ZMJ2 495 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 ADGRF2Q8IZF7 708 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 KLHL5Q96PQ7 755 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 NDST4Q9H3R1 872 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 MTRRQ9UBK8 725 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 CDY1Q9Y6F8 540 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 PLXNA4Q9HCM2 1894 aa13.11□□□□□ -0.31
RCCD1-209ENST00000557750 GOLGA6L19H0YKK7 550 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 PMM2O15305 246 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 OAZ2O95190 189 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 ZNF18P17022 549 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 ARPP19P56211 112 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 ZNF445P59923 1031 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 TCF15Q12870 199 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 MRPL58Q14197 206 aaKnown RBP13.1□□□□□ -0.31
RCCD1-209ENST00000557750 KRT31Q15323 416 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 DPH6Q7L8W6 267 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 THEM5Q8N1Q8 247 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 TMEM86AQ8N2M4 240 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 VPS16Q9H269 839 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 HSD3B7Q9H2F3 369 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 APOBEC3GQ9HC16 384 aaKnown RBP13.1□□□□□ -0.31
RCCD1-209ENST00000557750 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 FBXL5Q9UKA1 691 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
RCCD1-209ENST00000557750 ATP1A3P13637 1013 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 OR1D2P34982 312 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 RAP1GAPP47736 663 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 RBM10P98175 930 aaKnown RBP13.09□□□□□ -0.31
RCCD1-209ENST00000557750 LRMPQ12912 555 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 DUSP6Q16828 381 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 MIIPQ5JXC2 388 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 RSPO2Q6UXX9 243 aaPredicted RBP13.09□□□□□ -0.31
RCCD1-209ENST00000557750 PALB2Q86YC2 1186 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 SUGP1Q8IWZ8 645 aaKnown RBP13.09□□□□□ -0.31
RCCD1-209ENST00000557750 FBXL6Q8N531 539 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
RCCD1-209ENST00000557750 CLSTN3Q9BQT9 956 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 MRPL45Q9BRJ2 306 aaKnown RBP13.09□□□□□ -0.31
RCCD1-209ENST00000557750 CRACR2AQ9BSW2 395 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 PHF7Q9BWX1 381 aaPredicted RBP13.09□□□□□ -0.31
RCCD1-209ENST00000557750 NIF3L1Q9GZT8 377 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 SMYD3Q9H7B4 428 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 GCNT4Q9P109 453 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 CACNA1HO95180 2353 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 CFAP54Q96N23 3096 aa13.09□□□□□ -0.31
RCCD1-209ENST00000557750 ADAM12O43184 909 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 CLASP2O75122 1294 aaKnown RBP13.08□□□□□ -0.31
RCCD1-209ENST00000557750 CPB1P15086 417 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 ASPAP45381 313 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 LHX1P48742 406 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 CDH8P55286 799 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 LLGL2Q6P1M3 1020 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 GBP6Q6ZN66 633 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 PPFIBP1Q86W92 1011 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 RNF214Q8ND24 703 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 VN1R2Q8NFZ6 395 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 OR6B3Q8NGW1 331 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 KBTBD7Q8WVZ9 684 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 NT5C1BQ96P26 610 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 OXCT2Q9BYC2 517 aaPredicted RBP13.08□□□□□ -0.31
RCCD1-209ENST00000557750 INTS2Q9H0H0 1204 aaKnown RBP13.08□□□□□ -0.31
RCCD1-209ENST00000557750 SNX25Q9H3E2 840 aa13.08□□□□□ -0.31
RCCD1-209ENST00000557750 DDX43Q9NXZ2 648 aaKnown RBP13.08□□□□□ -0.31
RCCD1-209ENST00000557750 LIMA1Q9UHB6 759 aaKnown RBP13.08□□□□□ -0.31
RCCD1-209ENST00000557750 OR6C75A6NL08 312 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 TBC1D4O60343 1298 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 TACC1O75410 805 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 GLUD1P00367 558 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 WEE2P0C1S8 567 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 OR4Q2P0C623 313 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 WARSP23381 471 aaKnown RBP13.08□□□□□ -0.32
RCCD1-209ENST00000557750 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
RCCD1-209ENST00000557750 COPB1P53618 953 aaKnown RBP13.08□□□□□ -0.32
RCCD1-209ENST00000557750 EXOC3L4Q17RC7 722 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 FKBP15Q5T1M5 1219 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 OR10T2Q8NGX3 314 aa13.08□□□□□ -0.32
RCCD1-209ENST00000557750 SPATA18Q8TC71 538 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms