RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 C5orf42Q9H799 3197 aa9.69□□□□□ -0.86
CHD8-214ENST00000557727 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
CHD8-214ENST00000557727 FANCLQ9NW38 375 aa9.69□□□□□ -0.86
CHD8-214ENST00000557727 MTRRQ9UBK8 725 aa9.69□□□□□ -0.86
CHD8-214ENST00000557727 STK39Q9UEW8 545 aa9.69□□□□□ -0.86
CHD8-214ENST00000557727 L1RE1Q9UN81 338 aa9.69□□□□□ -0.86
CHD8-214ENST00000557727 TIMM13Q9Y5L4 95 aaPredicted RBP9.69□□□□□ -0.86
CHD8-214ENST00000557727 J3QL48 77 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 CYB561D2O14569 222 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 GABRDO14764 452 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 TEX28O15482 410 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 HCRTO43612 131 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 CLASP2O75122 1294 aaKnown RBP9.68□□□□□ -0.86
CHD8-214ENST00000557727 CXCL14O95715 111 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 KRT19P08727 400 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 FOSL2P15408 326 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 PAX3P23760 479 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 ATICP31939 592 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 LTBRP36941 435 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 PNPLA4P41247 253 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 ASPAP45381 313 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 MXI1P50539 228 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 KCNH2Q12809 1159 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 SMC1AQ14683 1233 aaKnown RBP9.68□□□□□ -0.86
CHD8-214ENST00000557727 PTPROQ16827 1216 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 DUSP6Q16828 381 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 SV2CQ496J9 727 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 CCDC40Q4G0X9 1142 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 TCP11X2Q5H9J9 407 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 DCAF17Q5H9S7 520 aaPredicted RBP9.68□□□□□ -0.86
CHD8-214ENST00000557727 WSCD1Q658N2 575 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 SPOPLQ6IQ16 392 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 SLC8B1Q6J4K2 584 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 LILRA6Q6PI73 481 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 TMC7Q7Z402 723 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 PDCL2Q8N4E4 241 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 AOPEPQ8N6M6 819 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 OR10T2Q8NGX3 314 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 RIN2Q8WYP3 895 aaPredicted RBP9.68□□□□□ -0.86
CHD8-214ENST00000557727 GAS2L1Q99501 681 aaPredicted RBP9.68□□□□□ -0.86
CHD8-214ENST00000557727 PKMYT1Q99640 499 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 PI4K2AQ9BTU6 479 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 CBX8Q9HC52 389 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 ATP13A2Q9NQ11 1180 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 ENTPD7Q9NQZ7 604 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 FNIP2Q9P278 1114 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 PUF60Q9UHX1 559 aaKnown RBP9.68□□□□□ -0.86
CHD8-214ENST00000557727 FBXL5Q9UKA1 691 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 POLIQ9UNA4 740 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 NUB1Q9Y5A7 615 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 BACE2Q9Y5Z0 518 aa9.68□□□□□ -0.86
CHD8-214ENST00000557727 UNC80Q8N2C7 3258 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.67□□□□□ -0.86
CHD8-214ENST00000557727 LRRC10BA6NIK2 292 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 KCNJ18B7U540 433 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 C2CD2LO14523 706 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 PER2O15055 1255 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 LINC01565O15544 149 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 TRAPPC3O43617 180 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 PAPLNO95428 1278 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 FGFR1OPO95684 399 aaKnown RBP9.67□□□□□ -0.86
CHD8-214ENST00000557727 URODP06132 367 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 ATP1A3P13637 1013 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 IGFBP4P22692 258 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 EEF1GP26641 437 aaKnown RBP9.67□□□□□ -0.86
CHD8-214ENST00000557727 ZNF165P49910 485 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 CLCN4P51793 760 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 ZNF445P59923 1031 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 BIRC3Q13489 604 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 KCNJ12Q14500 433 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 KRT31Q15323 416 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 PSMD5Q16401 504 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 CCDC142Q17RM4 750 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 TCERG1LQ5VWI1 586 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 USP37Q86T82 979 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 TOP6BLQ8N6T0 577 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 UBR7Q8N806 425 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 FBXL13Q8NEE6 735 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 TAF4BQ92750 862 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 HLA-CQ95604 372 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 TMEM209Q96SK2 561 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 MRPL45Q9BRJ2 306 aaKnown RBP9.67□□□□□ -0.86
CHD8-214ENST00000557727 BCO2Q9BYV7 579 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 SMYD3Q9H7B4 428 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 MMRN2Q9H8L6 949 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 MRPL17Q9NRX2 175 aaKnown RBP9.67□□□□□ -0.86
CHD8-214ENST00000557727 RAB20Q9NX57 234 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 LIMA1Q9UHB6 759 aaKnown RBP9.67□□□□□ -0.86
CHD8-214ENST00000557727 STXBP5LQ9Y2K9 1186 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD8-214ENST00000557727 SNX9Q9Y5X1 595 aa9.67□□□□□ -0.86
CHD8-214ENST00000557727 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.66□□□□□ -0.86
CHD8-214ENST00000557727 WDR27A2RRH5 827 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 P4HA2O15460 535 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 STX10O60499 249 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 TBX10O75333 385 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 TACC1O75410 805 aa9.66□□□□□ -0.86
CHD8-214ENST00000557727 ABLIM3O94929 683 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms