RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ZNF888P0CJ79 500 aaPredicted RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 PIM1P11309 404 aaPredicted RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ATP1A3P13637 1013 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 GYS1P13807 737 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 IDEP14735 1019 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 JUPP14923 745 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ZNF28P17035 718 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 XBP1P17861 261 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 EGR1P18146 543 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ACVR2AP27037 513 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ELF1P32519 619 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 IL13P35225 146 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 KRT9P35527 623 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 TUBP50607 506 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 EPHB3P54753 998 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 EIF5P55010 431 aaKnown RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 MXRA7P84157 204 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 MESP2Q0VG99 397 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 DUSP8Q13202 625 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 SLC29A2Q14542 456 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 KCNMB1Q16558 191 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 FAM110CQ1W6H9 321 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ADCK5Q3MIX3 580 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 PRR31Q5SQ13 230 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 UTP14CQ5TAP6 766 aaKnown RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ARL6IP4Q66PJ3 421 aaKnown RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 RAP1GAP2Q684P5 730 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 CFAP161Q6P656 301 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ZDHHC24Q6UX98 284 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ZSWIM9Q86XI8 627 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 CPOQ8IVL8 374 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 COLGALT2Q8IYK4 626 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 OR1N1Q8NGS0 311 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 SPPL3Q8TCT6 385 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 OTUD7AQ8TE49 926 aaPredicted RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ZNF384Q8TF68 577 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 CFHR4Q92496 578 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 EID2BQ96D98 161 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 RPL10LQ96L21 214 aaKnown RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 OR10A2Q9H208 303 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 DHX36Q9H2U1 1008 aaKnown RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 L2HGDHQ9H9P8 463 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 GPR35Q9HC97 309 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 TMEM8AQ9HCN3 771 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 ALG13Q9NP73 1137 aaKnown RBP3.64□□□□□ -1.83
TRAV28-201ENST00000557548 SAYSD1Q9NPB0 183 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 BLOC1S4Q9NUP1 217 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 FEM1BQ9UK73 627 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 RABGAP1Q9Y3P9 1069 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 HS3ST4Q9Y661 456 aa3.64□□□□□ -1.83
TRAV28-201ENST00000557548 MYOCOSA0A1B0GUC4 107 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 H7C4K7 107 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 SOAT2O75908 522 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 ACTL6BO94805 426 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 BAIAP3O94812 1187 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 HAUS5O94927 633 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 KIF20AO95235 890 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 TBX18O95935 607 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PLA2G1BP04054 148 aaKnown RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PECAM1P16284 738 aaPredicted RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 NPPBP16860 134 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 BTF3P20290 206 aaKnown RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 ADD2P35612 726 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 GZMKP49863 264 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PAPOLAP51003 745 aaKnown RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 ADCY7P51828 1080 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PNLIPRP1P54315 467 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PRKAA2P54646 552 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 ADAM8P78325 824 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 SURF1Q15526 300 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 MAPKAPK3Q16644 382 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 TBR1Q16650 682 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 ZNF827Q17R98 1081 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 TMTC4Q5T4D3 741 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 MZT2BQ6NZ67 158 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 MPZL3Q6UWV2 235 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 KIAA0408Q6ZU52 694 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 Q6ZUG5 572 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 KRT28Q7Z3Y7 464 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 FRMD5Q7Z6J6 570 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 USP37Q86T82 979 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PDSS2Q86YH6 399 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 HERC6Q8IVU3 1022 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 CCDC28AQ8IWP9 274 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 REXO1L1PQ8IX06 675 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 CMTM4Q8IZR5 234 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 AOPEPQ8N6M6 819 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 PCYOX1LQ8NBM8 494 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 FAM46DQ8NEK8 389 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 TMIEQ8NEW7 156 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 NLGN4YQ8NFZ3 816 aaPredicted RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 AFG1LQ8WV93 481 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 HERVK_113Q902F9 699 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 HDAC2Q92769 488 aaKnown RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 LPPQ93052 612 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 MAELQ96JY0 434 aaKnown RBP3.63□□□□□ -1.83
TRAV28-201ENST00000557548 SPATA5L1Q9BVQ7 753 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 SGPP1Q9BX95 441 aa3.63□□□□□ -1.83
TRAV28-201ENST00000557548 CARD11Q9BXL7 1154 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms